Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0216
         (739 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr...    33   0.16 
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr...    33   0.16 
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p...    33   0.16 
AF067613-14|ABA54416.1|  395|Caenorhabditis elegans Hypothetical...    31   1.1  
U64848-9|AAB04887.1|  128|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z83223-3|CAB05717.2|  385|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z73976-8|CAI79223.1|  215|Caenorhabditis elegans Hypothetical pr...    28   6.0  

>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
            F25F2.2 protein.
          Length = 4307

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
 Frame = -3

Query: 479  NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFQVGDQEHVHHLLVVYNGEAVLNKTGPSF 303
            NS YFVGH  F F  +S   ++++A V A     G+   V + +V  N E++      S 
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537

Query: 302  TQKLFAAPVDD*LHGIGFTLRI 237
              +L A P+D  L  +   LRI
Sbjct: 1538 EVRL-AKPLDPELQHVESILRI 1558


>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
            F25F2.2 protein.
          Length = 4307

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
 Frame = -3

Query: 479  NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFQVGDQEHVHHLLVVYNGEAVLNKTGPSF 303
            NS YFVGH  F F  +S   ++++A V A     G+   V + +V  N E++      S 
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537

Query: 302  TQKLFAAPVDD*LHGIGFTLRI 237
              +L A P+D  L  +   LRI
Sbjct: 1538 EVRL-AKPLDPELQHVESILRI 1558


>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
            protein F25F2.2 protein.
          Length = 4307

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
 Frame = -3

Query: 479  NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFQVGDQEHVHHLLVVYNGEAVLNKTGPSF 303
            NS YFVGH  F F  +S   ++++A V A     G+   V + +V  N E++      S 
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537

Query: 302  TQKLFAAPVDD*LHGIGFTLRI 237
              +L A P+D  L  +   LRI
Sbjct: 1538 EVRL-AKPLDPELQHVESILRI 1558


>AF067613-14|ABA54416.1|  395|Caenorhabditis elegans Hypothetical
           protein F56D6.15 protein.
          Length = 395

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = +1

Query: 352 KR*WTCSWSPT*NPHA--PTGATSSSLNTLLGGKKT 453
           K  + CS+ PT  P A  PT  T++++N  LGG++T
Sbjct: 113 KNYFVCSYDPTVQPKATTPTTTTAANVNCPLGGQQT 148


>U64848-9|AAB04887.1|  128|Caenorhabditis elegans Hypothetical
           protein C50E3.3 protein.
          Length = 128

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -2

Query: 402 WGVWVSGWRPGTRPSPLGRLQWGSCPQQNGSKFHAKTLCRSS 277
           WGVW  G    TR +  G  +   C    G KF+ KTL   S
Sbjct: 24  WGVWFDG----TRKTKCGPSELTQCNSLKGFKFNDKTLVSKS 61


>Z83223-3|CAB05717.2|  385|Caenorhabditis elegans Hypothetical
           protein E01G4.5 protein.
          Length = 385

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +2

Query: 485 AILRGHEQEYRISLAKKGGGCPIMNIHSEYTNSFESFVNRVIWENFYKPIVYI 643
           A L  H  EY+I L    G  P+  I +EY      F+    ++  Y+ + +I
Sbjct: 225 ARLASHIHEYQIKLWTCNGRQPVAYIDAEYNPEGTKFIGLFFYDGHYEVVDHI 277


>Z73976-8|CAI79223.1|  215|Caenorhabditis elegans Hypothetical
           protein T07C12.14 protein.
          Length = 215

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +1

Query: 118 KHLVEHEQEEKQWDLLDNYMVAEDPFLGPGKNQKLTLFKEIRSVK 252
           +HL + E E K+ D+L   ++AE  ++      +   F+E R  K
Sbjct: 35  EHLTQEEYERKKTDILRRAVLAESQYIALRTQLRDNKFREAREYK 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,112,065
Number of Sequences: 27780
Number of extensions: 438503
Number of successful extensions: 1216
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)