BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0215
(718 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase p... 25 2.3
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 23 7.2
U50474-1|AAA93476.1| 62|Anopheles gambiae protein ( Anopheles ... 23 9.5
AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein. 23 9.5
>AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 25.0 bits (52), Expect = 2.3
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = -1
Query: 676 DPQWENYARVVIGASIRYGHYHSAFQEFVKKHATRLNSMPSAFYSVN--LVARKPEKRLH 503
D Q Y R IG S+ + H+H + R + FY ++ +AR +R
Sbjct: 192 DEQRVAYWREDIGLSLHHWHWHLVYPATGPDRVVRKDRRGELFYHMHQQTIARYNIERFA 251
Query: 502 RPTATRGSF**TRNGVPIA 446
A SF R +P A
Sbjct: 252 NGLARTLSFSQLRESIPEA 270
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.4 bits (48), Expect = 7.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 384 DHKTIVPAITWVTQRPGNDRAAIGTPLRVHQ 476
DH + +P +T VTQR A+G + H+
Sbjct: 759 DHLSWIPHVTAVTQRAVQIAQAVGRLMPNHR 789
>U50474-1|AAA93476.1| 62|Anopheles gambiae protein ( Anopheles
gambiae putativetrypsin-like enzyme precursor, mRNA,
partial cds. ).
Length = 62
Score = 23.0 bits (47), Expect = 9.5
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -3
Query: 437 IAGALRYPRYRWYDRFMIKL 378
+ G L YP RW R+ +++
Sbjct: 30 LPGPLGYPPVRWIHRYRVRI 49
>AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein.
Length = 401
Score = 23.0 bits (47), Expect = 9.5
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -1
Query: 661 NYARVVIGASIRYGHYHSAFQEFVKKHATRLNSMPSAFYSVNL 533
++AR V G S+R YH E +++H + +S + +++L
Sbjct: 195 DFARKVPGNSVRLAFYHQITAE-LRRHPEQRDSYLAMIAALDL 236
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 828,840
Number of Sequences: 2352
Number of extensions: 19023
Number of successful extensions: 45
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -