Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0214
         (615 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    32   0.017
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   3.4  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 31.9 bits (69), Expect = 0.017
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = -3

Query: 502 PYEVKVPIDKPY--PVYKEVQVPLVKEVPYPVKYHVPIYFKK 383
           PY ++V +++P   P+YK +   + K VPY V+   PI  +K
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPYPIEVEK 238



 Score = 31.5 bits (68), Expect = 0.022
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
 Frame = -3

Query: 505 VPYEVKVPIDKPYP----VYKEVQVPLVKEVPYPVKYHVPIYFKK 383
           VP+ VKV I +PYP    V + +++P+ K +P  ++  VP   +K
Sbjct: 186 VPHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEK 230



 Score = 30.7 bits (66), Expect = 0.039
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -3

Query: 526 PLHRREKVPYEVKVPIDKPYPVYKEVQVPLVKEVPYPVKYHVP 398
           P   +  V   +K+PI K  P   E  VP   E PYP++   P
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPYPIEVEKP 239



 Score = 30.3 bits (65), Expect = 0.052
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
 Frame = -3

Query: 550 PLRSHQENPLHRREKVPYEVKVP--IDKPYPVYKEVQVPLVKEVPYPV----KYHVPI 395
           PL+ + E P+    K+P    +P  I+KP P   E   P+  E P+PV    K+ VP+
Sbjct: 199 PLQVNVEQPI----KIPIYKVIPKVIEKPVPYTVEKPYPIEVEKPFPVEVLKKFEVPV 252



 Score = 29.9 bits (64), Expect = 0.068
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 6/37 (16%)
 Frame = -3

Query: 505 VPYEVKVP----IDKPYPV--YKEVQVPLVKEVPYPV 413
           VPY V+ P    ++KP+PV   K+ +VP+ K  P PV
Sbjct: 224 VPYTVEKPYPIEVEKPFPVEVLKKFEVPVPKPYPVPV 260



 Score = 28.7 bits (61), Expect = 0.16
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 472 PYPVYKEVQVPLVKEVPYPVKYHVPIY 392
           P PV+++V VP+   VP  V ++V +Y
Sbjct: 167 PVPVFQKVGVPVPHPVPIAVPHYVKVY 193



 Score = 25.0 bits (52), Expect = 1.9
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -3

Query: 526 PLHRREKVPYEVKVPIDKPY--PVYKEVQVPLVKEVPYPVKYHVPIY 392
           P+ ++  VP    VPI  P+   VY     PL   V  P+K  +PIY
Sbjct: 169 PVFQKVGVPVPHPVPIAVPHYVKVYIPQPYPLQVNVEQPIK--IPIY 213


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 1   FIVSRCFIR-ISLNKVTCTSNTY 66
           F+ S C  R + + KVTCT NT+
Sbjct: 801 FVASVCGARAMDIAKVTCTVNTF 823


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,298
Number of Sequences: 2352
Number of extensions: 9901
Number of successful extensions: 68
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)