Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0214
(615 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 32 0.28
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 31 0.65
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 29 2.0
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 27 8.1
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 32.3 bits (70), Expect = 0.28
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = -3
Query: 580 PGPR*SASTKPLRSHQENPLHRREKVPYEVKVPIDKPYPVYKEVQVPLVKEVPYPVKYHV 401
P P+ KP+ H+ P + P +PI KP P K + P+ K P P +
Sbjct: 176 PMPKPKPKPKPMPKHKPKPFPKPMLFP--KPMPIPKPMPFPKPMPKPMPKHKPKP--FPK 231
Query: 400 PIYFKK 383
P+ F K
Sbjct: 232 PMLFPK 237
Score = 31.1 bits (67), Expect = 0.65
Identities = 19/76 (25%), Positives = 29/76 (38%)
Frame = -3
Query: 610 PLQGQSREALPGPR*SASTKPLRSHQENPLHRREKVPYEVKVPIDKPYPVYKEVQVPLVK 431
P E P P P + P+ + + P+ + KP P+ K + P K
Sbjct: 158 PKSKPKSEPFPNPMPFPKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFP--K 215
Query: 430 EVPYPVKYHVPIYFKK 383
+P P+ H P F K
Sbjct: 216 PMPKPMPKHKPKPFPK 231
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = -3
Query: 610 PLQGQSREALPGPR*SASTKPLRSHQENPLHRREKVPYEVKVPIDKPYPVYKEVQVPLVK 431
P E P P KP+ H+ P + P + PI KP P K + P K
Sbjct: 94 PKSKPKSEPFPNPMPFPKPKPMPKHKPKPFPKPMLFPKPM--PIPKPMPFPKPMLFP--K 149
Query: 430 EVPYP 416
+P+P
Sbjct: 150 PMPFP 154
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = -3
Query: 583 LPGPR*SASTKPLRSHQENPLHRREKVPYEVKVPIDKPYPVYKEVQVPLVKEVPYPVKYH 404
+P P+ KP+ + P + + P+ +P KP P K P+ K P P +
Sbjct: 139 MPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPMPKPKPKPKPMPKHKPKP--FP 196
Query: 403 VPIYFKK 383
P+ F K
Sbjct: 197 KPMLFPK 203
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = -3
Query: 580 PGPR*SASTKPLRSHQENPLHRREKVPYEVKVPIDKPYPVYKEVQVPLVKEVPYPVKYHV 401
P P+ KP+ + P + + P+ +P KP P+ K P K + +P +
Sbjct: 76 PFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPKPMPKHKPKPFPKPMLFPKPMPI 135
Query: 400 P 398
P
Sbjct: 136 P 136
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = -3
Query: 583 LPGPR*SASTKPLRSHQENPLHRREKVPYEVKVPIDKPYPVYKEVQVPLVKEVPYPVKYH 404
+P P+ +KP NP+ P +P KP P K + P +P P+ +
Sbjct: 87 MPFPKPMPKSKPKSEPFPNPM----PFPKPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFP 142
Query: 403 VPIYFKK 383
P+ F K
Sbjct: 143 KPMLFPK 149
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 31.1 bits (67), Expect = 0.65
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 505 VPYEVKVPIDKPYPVYKEVQVPLVKEVPYPVKYHVPI 395
+P + P+ P PV + V VP+ +P P+ VP+
Sbjct: 5 IPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPV 41
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 505 VPYEVKVPIDKPYPVYKEVQVPLVKEVPYPVKYHVPI 395
+P V VP P PV + +P+ +P PV VP+
Sbjct: 9 IPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVPV 45
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -3
Query: 505 VPYEVKVPIDKPYPVYKEVQVPLVKEVPYPVKYHVPI 395
+P VP+ P P V +P+ +P P+ VP+
Sbjct: 7 IPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPV 43
>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical
protein T04G9.1 protein.
Length = 1610
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -3
Query: 550 PLRSHQENPLHRREKVPYEVKVPIDKPYPVYKEVQVPLVKEVP 422
P R H P++ R+K Y V KP PV + QVP V VP
Sbjct: 102 PQRVHSIPPVYHRQKRSYASSVQQQKPPPVPIKQQVP-VPSVP 143
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 472 PYPVYKEVQVPLVKEVPYPVKYHVPI 395
P PV + V VP+ +VP P++ VP+
Sbjct: 149 PQPVIQHVPVPVPVQVPVPIRVPVPV 174
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -3
Query: 553 KPLRSHQENPLHRREKVPYEVKVPIDKPYPVYKEVQVPLVKEVPYPVKYHVPIY 392
+P+ H P+ + VP V VP+ P PVY+ + P P P+Y
Sbjct: 150 QPVIQHVPVPVPVQVPVPIRVPVPVPVPTPVYQPTYCAV---PPCPAPAATPVY 200
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = -3
Query: 559 STKPLRSHQENPLHRREKVPYEVKVPIDKPYPVYKEVQVPLVKEVPYPVKYHVPI 395
S + ++++ P + +VP +V V + P PV + V P+ + P P+ +P+
Sbjct: 87 SNRKKLTYKQPPRNSTPQVP-KVAVTLPVPEPVPEPVPEPVPESTPEPISEPLPV 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,031,851
Number of Sequences: 27780
Number of extensions: 237465
Number of successful extensions: 807
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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