Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0209
(720 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 184 4e-47
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 184 4e-47
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 184 4e-47
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 184 4e-47
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 176 1e-44
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 176 1e-44
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 175 3e-44
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 175 3e-44
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 172 2e-43
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 171 3e-43
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 171 3e-43
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 170 7e-43
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 168 3e-42
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 165 3e-41
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 165 4e-41
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 165 4e-41
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 105 4e-23
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 104 7e-23
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 104 7e-23
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 103 2e-22
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 103 2e-22
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 102 2e-22
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 91 1e-18
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 91 1e-18
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 54 1e-07
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 54 1e-07
Z92830-7|CAB07360.1| 659|Caenorhabditis elegans Hypothetical pr... 29 2.5
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 28 5.8
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 28 5.8
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 5.8
AC025726-34|AAY43986.1| 308|Caenorhabditis elegans Hypothetical... 28 5.8
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 7.7
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 7.7
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 7.7
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 7.7
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 7.7
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 7.7
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 7.7
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 7.7
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 184 bits (449), Expect = 4e-47
Identities = 92/164 (56%), Positives = 102/164 (62%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 403 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWS 582
TIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGG G + +
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 168
Query: 583 SPSTPRLRXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
P + DC+FMVDNEAIYDI
Sbjct: 169 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDI 212
Score = 120 bits (290), Expect = 8e-28
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 260 TYP 268
P
Sbjct: 61 HVP 63
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYNFI 641
TGSGFTSLLMERLSVDYGKK+KLEF+IYPAPQV T VVEPYN I
Sbjct: 145 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSI 188
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 184 bits (449), Expect = 4e-47
Identities = 92/164 (56%), Positives = 102/164 (62%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 48 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 107
Query: 403 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWS 582
TIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGG G + +
Sbjct: 108 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 167
Query: 583 SPSTPRLRXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
P + DC+FMVDNEAIYDI
Sbjct: 168 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDI 211
Score = 118 bits (285), Expect = 3e-27
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = +2
Query: 83 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 262
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 263 YP 268
P
Sbjct: 61 VP 62
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYNFI 641
TGSGFTSLLMERLSVDYGKK+KLEF+IYPAPQV T VVEPYN I
Sbjct: 144 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSI 187
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 184 bits (449), Expect = 4e-47
Identities = 92/164 (56%), Positives = 102/164 (62%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 403 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWS 582
TIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGG G + +
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 168
Query: 583 SPSTPRLRXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
P + DC+FMVDNEAIYDI
Sbjct: 169 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDI 212
Score = 120 bits (290), Expect = 8e-28
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 260 TYP 268
P
Sbjct: 61 HVP 63
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYNFI 641
TGSGFTSLLMERLSVDYGKK+KLEF+IYPAPQV T VVEPYN I
Sbjct: 145 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSI 188
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 184 bits (449), Expect = 4e-47
Identities = 92/164 (56%), Positives = 102/164 (62%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 403 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWS 582
TIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGG G + +
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 168
Query: 583 SPSTPRLRXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
P + DC+FMVDNEAIYDI
Sbjct: 169 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDI 212
Score = 120 bits (290), Expect = 8e-28
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 260 TYP 268
P
Sbjct: 61 HVP 63
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYNFI 641
TGSGFTSLLMERLSVDYGKK+KLEF+IYPAPQV T VVEPYN I
Sbjct: 145 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSI 188
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 176 bits (429), Expect = 1e-44
Identities = 86/164 (52%), Positives = 103/164 (62%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F S ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 403 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWS 582
T+GKE++D VLDRIR+LAD C+GLQGF +FHSFGG G + +
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 583 SPSTPRLRXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
P + DCAFMVDNEAIYDI
Sbjct: 167 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 210
Score = 101 bits (242), Expect = 5e-22
Identities = 46/63 (73%), Positives = 50/63 (79%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
Score = 85.0 bits (201), Expect = 5e-17
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYNFI 641
TGSGFTSLLMERLSVDYGKKSKLEF+IYPAPQV T VVEPYN I
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 176 bits (429), Expect = 1e-44
Identities = 86/164 (52%), Positives = 103/164 (62%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F S ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 403 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWS 582
T+GKE++D VLDRIR+LAD C+GLQGF +FHSFGG G + +
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 583 SPSTPRLRXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
P + DCAFMVDNEAIYDI
Sbjct: 167 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 210
Score = 101 bits (242), Expect = 5e-22
Identities = 46/63 (73%), Positives = 50/63 (79%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
Score = 85.0 bits (201), Expect = 5e-17
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYNFI 641
TGSGFTSLLMERLSVDYGKKSKLEF+IYPAPQV T VVEPYN I
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 175 bits (426), Expect = 3e-44
Identities = 85/164 (51%), Positives = 103/164 (62%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 403 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWS 582
T+GKE++D VLDRIR+LAD C+GLQGF +FHSFGG G + +
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 583 SPSTPRLRXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
P + DCAFMVDNEAIYDI
Sbjct: 167 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 210
Score = 100 bits (239), Expect = 1e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
Score = 85.0 bits (201), Expect = 5e-17
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYNFI 641
TGSGFTSLLMERLSVDYGKKSKLEF+IYPAPQV T VVEPYN I
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 175 bits (426), Expect = 3e-44
Identities = 85/164 (51%), Positives = 103/164 (62%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 403 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWS 582
T+GKE++D VLDRIR+LAD C+GLQGF +FHSFGG G + +
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 583 SPSTPRLRXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
P + DCAFMVDNEAIYDI
Sbjct: 167 FSIYPAPQVCTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 210
Score = 100 bits (239), Expect = 1e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
Score = 85.0 bits (201), Expect = 5e-17
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYNFI 641
TGSGFTSLLMERLSVDYGKKSKLEF+IYPAPQV T VVEPYN I
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNSI 186
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 172 bits (418), Expect = 2e-43
Identities = 83/164 (50%), Positives = 100/164 (60%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHY
Sbjct: 54 FNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHY 113
Query: 403 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWS 582
TIGKEI+D+V+DR+R+L + C GLQGFL+FHSFGG G + +
Sbjct: 114 TIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLE 173
Query: 583 SPSTPRLRXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
P + DC+FMVDNEAIYDI
Sbjct: 174 FCIYPAPQVSTSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDI 217
Score = 102 bits (244), Expect = 3e-22
Identities = 44/64 (68%), Positives = 51/64 (79%)
Frame = +2
Query: 77 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAA 256
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET A
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 257 STYP 268
P
Sbjct: 65 KHVP 68
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYNFI 641
TGSGFT+LLMERLSVDYGKKSKLEF IYPAPQV T +VEPYN I
Sbjct: 150 TGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNSI 193
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 171 bits (417), Expect = 3e-43
Identities = 83/164 (50%), Positives = 101/164 (61%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + ++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 403 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWS 582
T+GKE++D LDRIR+LAD C+GLQGF +FHSFGG G + +
Sbjct: 107 TVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 583 SPSTPRLRXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
P + DCAFMVDNEAIYDI
Sbjct: 167 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 210
Score = 99.1 bits (236), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
Score = 85.0 bits (201), Expect = 5e-17
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYNFI 641
TGSGFTSLLMERLSVDYGKKSKLEF+IYPAPQV T VVEPYN I
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 171 bits (417), Expect = 3e-43
Identities = 83/164 (50%), Positives = 101/164 (61%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + ++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 403 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWS 582
T+GKE++D LDRIR+LAD C+GLQGF +FHSFGG G + +
Sbjct: 107 TVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 583 SPSTPRLRXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
P + DCAFMVDNEAIYDI
Sbjct: 167 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 210
Score = 99.1 bits (236), Expect = 3e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
Score = 85.0 bits (201), Expect = 5e-17
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYNFI 641
TGSGFTSLLMERLSVDYGKKSKLEF+IYPAPQV T VVEPYN I
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 170 bits (414), Expect = 7e-43
Identities = 82/164 (50%), Positives = 102/164 (62%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
+ F S KHVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHY
Sbjct: 49 YNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHY 108
Query: 403 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWS 582
TIGKE++D+V+DR+R+L ++C LQGFLIFHSFGG G + +
Sbjct: 109 TIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLE 168
Query: 583 SPSTPRLRXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
P + DC+F++DNEAIY+I
Sbjct: 169 FSIYPAPQISTSMVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEI 212
Score = 101 bits (243), Expect = 4e-22
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 260 TYP 268
P
Sbjct: 61 HVP 63
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/42 (80%), Positives = 40/42 (95%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYN 635
TGSGFTSL+MERLS+DYGKK+KLEF+IYPAPQ+ T +VEPYN
Sbjct: 145 TGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEPYN 186
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 168 bits (409), Expect = 3e-42
Identities = 80/153 (52%), Positives = 96/153 (62%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 435
+HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D L
Sbjct: 57 RHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTL 116
Query: 436 DRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWSSPSTPRLRXXX 615
DRIR+LA+ C GLQGF +FHSFGG G + P +
Sbjct: 117 DRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQIST 176
Query: 616 XXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
DC+FMVDNEAIYDI
Sbjct: 177 SVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDI 209
Score = 86.2 bits (204), Expect = 2e-17
Identities = 41/63 (65%), Positives = 43/63 (68%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 260 TYP 268
P
Sbjct: 58 HVP 60
Score = 80.6 bits (190), Expect = 1e-15
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYNFI 641
TGSGFTS+LMERLS +YGKKSKLEF+IYPAPQ+ T VVEPYN I
Sbjct: 142 TGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPYNSI 185
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 165 bits (401), Expect = 3e-41
Identities = 80/163 (49%), Positives = 97/163 (59%)
Frame = +1
Query: 226 QHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 405
Q F + KHVPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYT
Sbjct: 53 QAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYT 112
Query: 406 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWSS 585
IGKE++D+VLDRIRK + C GLQGFL+FHSFGG G + +
Sbjct: 113 IGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEF 172
Query: 586 PSTPRLRXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
P + DC+FMVDNEAIYD+
Sbjct: 173 SVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIYDL 215
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYNFI 641
TGSGF+SLLMERLSV++GKKSKLEF++YPAPQV T VVEPYN I
Sbjct: 148 TGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSI 191
Score = 71.3 bits (167), Expect = 6e-13
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +2
Query: 83 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSET 247
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSES 59
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 165 bits (400), Expect = 4e-41
Identities = 81/153 (52%), Positives = 96/153 (62%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 435
KHVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+
Sbjct: 66 KHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVM 125
Query: 436 DRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWSSPSTPRLRXXX 615
DR+++LA+ C GLQGF+IFHSFGG G L + P +
Sbjct: 126 DRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVST 185
Query: 616 XXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
DC FMVDNEAIYDI
Sbjct: 186 SMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDI 218
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = +2
Query: 83 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 262
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 263 YP 268
P
Sbjct: 68 VP 69
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/44 (81%), Positives = 38/44 (86%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYNFI 641
TGSGF SLLMERLS +YGKK KLEFAIYPAPQV T +VEPYN I
Sbjct: 151 TGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSI 194
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 165 bits (400), Expect = 4e-41
Identities = 81/153 (52%), Positives = 96/153 (62%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 435
KHVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+
Sbjct: 38 KHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVM 97
Query: 436 DRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWSSPSTPRLRXXX 615
DR+++LA+ C GLQGF+IFHSFGG G L + P +
Sbjct: 98 DRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVST 157
Query: 616 XXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
DC FMVDNEAIYDI
Sbjct: 158 SMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDI 190
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/44 (81%), Positives = 38/44 (86%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYNFI 641
TGSGF SLLMERLS +YGKK KLEFAIYPAPQV T +VEPYN I
Sbjct: 123 TGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSI 166
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2
Query: 146 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAASTYP 268
++CLEHGIQPDG D T ++ NTFF+ET P
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVP 41
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 105 bits (251), Expect = 4e-23
Identities = 60/153 (39%), Positives = 77/153 (50%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 435
K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 436 DRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWSSPSTPRLRXXX 615
D +RK A+ C LQGF + HS GG G S + S P +
Sbjct: 118 DVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSD 177
Query: 616 XXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
D F +DNEA+YDI
Sbjct: 178 TVVEPYNATLSVHQLVENTDETFCIDNEALYDI 210
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYN 635
TGSG +LL+ ++ +Y + F++ P+P+V VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYN 184
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 104 bits (249), Expect = 7e-23
Identities = 48/84 (57%), Positives = 60/84 (71%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 435
K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 436 DRIRKLADQCTGLQGFLIFHSFGG 507
D IRK A+ C LQGF + HS GG
Sbjct: 118 DVIRKEAEGCDCLQGFQLTHSLGG 141
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 181
MRE + V GQ G QIG+ WE+ EHGIQPDG
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDG 34
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYN 635
TGSG +LL+ ++ ++ + F++ P+P+V VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEPYN 184
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 104 bits (249), Expect = 7e-23
Identities = 48/84 (57%), Positives = 60/84 (71%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 435
K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 436 DRIRKLADQCTGLQGFLIFHSFGG 507
D IRK A+ C LQGF + HS GG
Sbjct: 118 DVIRKEAEGCDCLQGFQLTHSLGG 141
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 181
MRE + V GQ G QIG+ WE+ EHGIQPDG
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDG 34
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYN 635
TGSG +LL+ ++ +Y + F++ P+P+V VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYN 184
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 103 bits (246), Expect = 2e-22
Identities = 62/156 (39%), Positives = 80/156 (51%), Gaps = 1/156 (0%)
Frame = +1
Query: 250 SCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 429
S K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 56 SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDN 115
Query: 430 VLDRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WS-VSPLTTARSLNWSSPSTPRLR 606
VLD +RK A+ LQGF + HS GG G S + R +N S P +
Sbjct: 116 VLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFS-VVPSPK 174
Query: 607 XXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
D F +DNEA+YDI
Sbjct: 175 VSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDI 210
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYN 635
TGSG +LL+ ++ +Y + F++ P+P+V VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYN 184
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 103 bits (246), Expect = 2e-22
Identities = 62/156 (39%), Positives = 80/156 (51%), Gaps = 1/156 (0%)
Frame = +1
Query: 250 SCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 429
S K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 56 SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDN 115
Query: 430 VLDRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WS-VSPLTTARSLNWSSPSTPRLR 606
VLD +RK A+ LQGF + HS GG G S + R +N S P +
Sbjct: 116 VLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFS-VVPSPK 174
Query: 607 XXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
D F +DNEA+YDI
Sbjct: 175 VSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDI 210
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYN 635
TGSG +LL+ ++ +Y + F++ P+P+V VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYN 184
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 102 bits (245), Expect = 2e-22
Identities = 58/153 (37%), Positives = 75/153 (49%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 435
K+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 436 DRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY*WSVSPLTTARSLNWSSPSTPRLRXXX 615
D +RK A+ C LQGF + HS GG G S + + P +
Sbjct: 118 DVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSD 177
Query: 616 XXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
D F +DNEA+YDI
Sbjct: 178 TVVEPYNATLSVHQLVENTDETFCIDNEALYDI 210
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYN 635
TGSG +LL+ ++ +Y + + F++ P+P+V VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYN 184
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 90.6 bits (215), Expect = 1e-18
Identities = 58/157 (36%), Positives = 80/157 (50%), Gaps = 4/157 (2%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 435
K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVL 117
Query: 436 DRIRKLADQCTGLQGFLIFHSFGG--VPALGSLPY*WSVSPLTTARSLNWSSPST--PRL 603
IR+ A+ L+GF + HS GG LGSL +S L S S + P
Sbjct: 118 SVIRREAEAADSLEGFQLIHSLGGGTGSGLGSL----LISKLREEYSDKTLSTCSIIPSA 173
Query: 604 RXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
+ D F +DNEAI+DI
Sbjct: 174 KVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDI 210
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 196
M+E I+V VGQ G QIG WE EHG+Q DG D
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYNFI 641
TGSG SLL+ +L +Y K+ +I P+ +V VVEPYN I
Sbjct: 143 TGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAI 186
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 90.6 bits (215), Expect = 1e-18
Identities = 58/157 (36%), Positives = 80/157 (50%), Gaps = 4/157 (2%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 435
K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVL 117
Query: 436 DRIRKLADQCTGLQGFLIFHSFGG--VPALGSLPY*WSVSPLTTARSLNWSSPST--PRL 603
IR+ A+ L+GF + HS GG LGSL +S L S S + P
Sbjct: 118 SVIRREAEAADSLEGFQLIHSLGGGTGSGLGSL----LISKLREEYSDKTLSTCSIIPSA 173
Query: 604 RXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 714
+ D F +DNEAI+DI
Sbjct: 174 KVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDI 210
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +2
Query: 80 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 196
M+E I+V VGQ G QIG WE EHG+Q DG D
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTGVVEPYNFI 641
TGSG SLL+ +L +Y K+ +I P+ +V VVEPYN I
Sbjct: 143 TGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAI 186
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Frame = +1
Query: 232 FLQRDRSCKHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHY 402
F Q D +VPRAV VDLEP V++ +++ + LF+ + + A NN+A G Y
Sbjct: 53 FYQADDD-HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-Y 110
Query: 403 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGVPALGS 525
G+E+ + ++D I + A+ L G L HS G G+
Sbjct: 111 CQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGT 151
Score = 34.7 bits (76), Expect = 0.067
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 92 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 184
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTG-VVEPYNFI 641
TGSG SLL+ERL + KK ++++ T VV PYN++
Sbjct: 147 TGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWV 191
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Frame = +1
Query: 232 FLQRDRSCKHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHY 402
F Q D +VPRAV VDLEP V++ +++ + LF+ + + A NN+A G Y
Sbjct: 53 FYQADDD-HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-Y 110
Query: 403 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGVPALGS 525
G+E+ + ++D I + A+ L G L HS G G+
Sbjct: 111 CQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGT 151
Score = 34.7 bits (76), Expect = 0.067
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 92 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 184
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 510 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVFTG-VVEPYNFI 641
TGSG SLL+ERL + KK ++++ T VV PYN++
Sbjct: 147 TGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWV 191
>Z92830-7|CAB07360.1| 659|Caenorhabditis elegans Hypothetical
protein F11A5.8 protein.
Length = 659
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 489 LPLLRWSTGSGFTSL-LMERLSVDYGKKSK 575
+PL W G+GF +L L E ++VD KKSK
Sbjct: 195 MPLRLWQFGAGFVALFLREVITVDSVKKSK 224
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = -2
Query: 599 RGVDGELQFRLLAVVNGETLHQ*GSEPRAGTPPKEWKIRNPCRPVHWSASLRILSKTK 426
R +D EL+ R AV +GE + + EP+ PKE K + P + S+ R++ K K
Sbjct: 841 RELDNELE-RCEAVHSGEKIKK-VKEPKPPKQPKEKKEKPPPKKKEMSSRDRLMKKLK 896
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = -2
Query: 599 RGVDGELQFRLLAVVNGETLHQ*GSEPRAGTPPKEWKIRNPCRPVHWSASLRILSKTK 426
R +D EL+ R AV +GE + + EP+ PKE K + P + S+ R++ K K
Sbjct: 854 RELDNELE-RCEAVHSGEKIKK-VKEPKPPKQPKEKKEKPPPKKKEMSSRDRLMKKLK 909
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 369 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 274
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AC025726-34|AAY43986.1| 308|Caenorhabditis elegans Hypothetical
protein Y71G12B.30 protein.
Length = 308
Score = 28.3 bits (60), Expect = 5.8
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQ--LITGK-EDAANNYAR 393
F H Q+D+S +++ ++D P ++ + +L HP++ L+ G E N
Sbjct: 87 FPHVSQKDKSSRYLFLGDYIDRGPFSIEVITLLFAYRLLHPQKMFLLRGNHESRPVNMQY 146
Query: 394 GHYTIGKEIVDLVLDRIRKLADQC---TGLQGFLIFHSFGGVP 513
G Y K + L + A C + G I GG+P
Sbjct: 147 GFYNECKRRYSVTLYETFQWAFYCMPLCAIVGGRIMCMHGGIP 189
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 298 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 441
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 298 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 441
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 298 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 441
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 298 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 441
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 298 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 441
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 298 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 441
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 298 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 441
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 298 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 441
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,218,856
Number of Sequences: 27780
Number of extensions: 380728
Number of successful extensions: 979
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -