Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0208
         (591 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537991-1|CAD97950.1|  626|Homo sapiens hypothetical protein pr...    31   2.3  
BC105583-1|AAI05584.1|  560|Homo sapiens SRP72 protein protein.        31   2.3  
BC046143-1|AAH46143.1|  559|Homo sapiens Similar to signal recog...    31   2.3  
BC040134-1|AAH40134.1|  559|Homo sapiens SRP72 protein protein.        31   2.3  
BC032609-1|AAH32609.1|  559|Homo sapiens SRP72 protein protein.        31   2.3  
BC017057-1|AAH17057.1|  559|Homo sapiens SRP72 protein protein.        31   2.3  
AF077019-1|AAC27324.1|  671|Homo sapiens signal recognition part...    31   2.3  
AF069765-1|AAC97490.1|  671|Homo sapiens signal recognition part...    31   2.3  
AF038851-1|AAQ13423.1|  671|Homo sapiens putative signal recogni...    31   2.3  
AY193820-1|AAP31887.1|  124|Homo sapiens anti-HPA-5b immunoglobu...    29   9.3  

>BX537991-1|CAD97950.1|  626|Homo sapiens hypothetical protein
           protein.
          Length = 626

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 311 TVPTANQLSVPFSDLISQDEYRQLRYDVCMYV*ETLIKN 427
           T+ +ANQ +    +L  Q  YR  RYD C+ V   L++N
Sbjct: 106 TIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRN 144


>BC105583-1|AAI05584.1|  560|Homo sapiens SRP72 protein protein.
          Length = 560

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 311 TVPTANQLSVPFSDLISQDEYRQLRYDVCMYV*ETLIKN 427
           T+ +ANQ +    +L  Q  YR  RYD C+ V   L++N
Sbjct: 100 TIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRN 138


>BC046143-1|AAH46143.1|  559|Homo sapiens Similar to signal
           recognition particle 72kDa protein.
          Length = 559

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 311 TVPTANQLSVPFSDLISQDEYRQLRYDVCMYV*ETLIKN 427
           T+ +ANQ +    +L  Q  YR  RYD C+ V   L++N
Sbjct: 100 TIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRN 138


>BC040134-1|AAH40134.1|  559|Homo sapiens SRP72 protein protein.
          Length = 559

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 311 TVPTANQLSVPFSDLISQDEYRQLRYDVCMYV*ETLIKN 427
           T+ +ANQ +    +L  Q  YR  RYD C+ V   L++N
Sbjct: 100 TIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRN 138


>BC032609-1|AAH32609.1|  559|Homo sapiens SRP72 protein protein.
          Length = 559

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 311 TVPTANQLSVPFSDLISQDEYRQLRYDVCMYV*ETLIKN 427
           T+ +ANQ +    +L  Q  YR  RYD C+ V   L++N
Sbjct: 100 TIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRN 138


>BC017057-1|AAH17057.1|  559|Homo sapiens SRP72 protein protein.
          Length = 559

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 311 TVPTANQLSVPFSDLISQDEYRQLRYDVCMYV*ETLIKN 427
           T+ +ANQ +    +L  Q  YR  RYD C+ V   L++N
Sbjct: 100 TIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRN 138


>AF077019-1|AAC27324.1|  671|Homo sapiens signal recognition
           particle 72 protein.
          Length = 671

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 311 TVPTANQLSVPFSDLISQDEYRQLRYDVCMYV*ETLIKN 427
           T+ +ANQ +    +L  Q  YR  RYD C+ V   L++N
Sbjct: 100 TIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRN 138


>AF069765-1|AAC97490.1|  671|Homo sapiens signal recognition
           particle 72 protein.
          Length = 671

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 311 TVPTANQLSVPFSDLISQDEYRQLRYDVCMYV*ETLIKN 427
           T+ +ANQ +    +L  Q  YR  RYD C+ V   L++N
Sbjct: 100 TIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRN 138


>AF038851-1|AAQ13423.1|  671|Homo sapiens putative signal
           recognition particle protein.
          Length = 671

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 311 TVPTANQLSVPFSDLISQDEYRQLRYDVCMYV*ETLIKN 427
           T+ +ANQ +    +L  Q  YR  RYD C+ V   L++N
Sbjct: 100 TIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRN 138


>AY193820-1|AAP31887.1|  124|Homo sapiens anti-HPA-5b immunoglobulin
           heavy chain variable region protein.
          Length = 124

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -2

Query: 332 IGLL*EQSGSSFT*HQCGW*HLFAINGYHWI 240
           + L  + SGSSFT H   W    AI G  WI
Sbjct: 18  LSLTCDVSGSSFTFHHWNWIRQSAIKGLEWI 48


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,625,362
Number of Sequences: 237096
Number of extensions: 1503124
Number of successful extensions: 1962
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1962
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)