Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0207
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.5  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   4.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.5  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   7.5  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   7.5  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   7.5  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   7.5  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   7.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.9  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -1

Query: 701 GVKFRSNCPVWKSFESQSQVGVQNAGSP-QQSEAGTSRLDKGF 576
           GV F + CP+      +    V N+G+    S +G  R D  F
Sbjct: 148 GVPFVTQCPIHPGMTFRYHFNVHNSGTHFWHSHSGFQRSDGTF 190


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
 Frame = +2

Query: 323 KNEMPV--SSRTIPQSTPHGTYGTKYRGNRSPSADPEA 430
           K E P   S R     TPHG+  +      SPSA P A
Sbjct: 239 KKESPQMQSYRPTGNITPHGSNTSSLITTPSPSASPLA 276


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 497 EEAGFGSPGPKMGA 538
           +EAG GSPGP   A
Sbjct: 290 KEAGGGSPGPYTNA 303


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 254 CVSRGLFCH 228
           C+ RGLFC+
Sbjct: 129 CIERGLFCN 137


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3

Query: 168 SFFKRGLWRVLNRRQRLGSAP 106
           +FF R +WR +    +  S P
Sbjct: 387 NFFLREIWRTVKYHNKTSSVP 407


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3

Query: 168 SFFKRGLWRVLNRRQRLGSAP 106
           +FF R +WR +    +  S P
Sbjct: 387 NFFLREIWRTVKYHNKTSSVP 407


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3

Query: 168 SFFKRGLWRVLNRRQRLGSAP 106
           +FF R +WR +    +  S P
Sbjct: 387 NFFLREIWRTVKYHNKTSSVP 407


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3

Query: 168 SFFKRGLWRVLNRRQRLGSAP 106
           +FF R +WR +    +  S P
Sbjct: 387 NFFLREIWRTVKYHNKTSSVP 407


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3

Query: 168 SFFKRGLWRVLNRRQRLGSAP 106
           +FF R +WR +    +  S P
Sbjct: 386 NFFLREIWRTVKYHNKTSSVP 406


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 335 PVSSRTIPQSTPHGTYG 385
           P+ S+ +PQ   +G YG
Sbjct: 283 PLVSQRVPQLAKNGAYG 299


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 33  VGQTKHTAHLMVSGVPVAHGLQQ 101
           VG   H+A + V G+P    +++
Sbjct: 497 VGSADHSARINVYGLPFVRSMEK 519


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,963
Number of Sequences: 336
Number of extensions: 5296
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)