Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0207
         (713 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            30   0.083
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    26   1.0  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   4.1  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   5.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.4  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   7.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   7.2  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   9.5  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   9.5  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   9.5  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   9.5  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   9.5  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    23   9.5  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   9.5  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   9.5  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 29.9 bits (64), Expect = 0.083
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +2

Query: 446  EWDYRQSERPSSVWSQMEEAGFG-SPGPKMGAV 541
            EWD+    +P++VW  +E A FG S  PK+ +V
Sbjct: 2856 EWDW---SKPATVWGALEGASFGLSISPKLNSV 2885


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -1

Query: 275 GPLRSSTCVSRGLFCHVPSGYGMSSPPRCFPSAMTCPSSNEACGEY*TEGSGL 117
           G   S+ CV+ G +   PS    + P    P+    P++ E  G+Y  + S +
Sbjct: 773 GSTASAECVTNGDYMLQPSNAPFTPPTDRTPTPPPLPATAEPMGDYMIQPSNI 825


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 20/77 (25%), Positives = 28/77 (36%), Gaps = 1/77 (1%)
 Frame = +2

Query: 335 PVSSRTIP-QSTPHGTYGTKYRGNRSPSADPEAPNDP*EWDYRQSERPSSVWSQMEEAGF 511
           P   + +P +  P G  G K     S S     P  P    Y     P  +  +  + G+
Sbjct: 445 PKGGQGVPGRPGPEGMPGDKGDKGESGSVGMPGPQGP--RGYPGQPGPEGLRGEPGQPGY 502

Query: 512 GSPGPKMGAVLHARPDL 562
           G PG K  A +   P L
Sbjct: 503 GIPGQKGNAGMAGFPGL 519


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 77  TRRPWTSAMPGAEPSRCLLFNTLHKPRLKKDMS 175
           TR P T   PG    RC L   LH+  L  + +
Sbjct: 491 TRVPQTRTSPGKVFERCELAQELHRQGLSLEQT 523


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 518  GSQNQLLPFDSIQRRAVRIVDNPILTDRL 432
            G     L FD +   A +++D  I+TD L
Sbjct: 2944 GRPESTLIFDKLPSAASKVIDEIIITDNL 2972


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 364 HSPWNIRYKIQREPKSLRRPRGSKRSVRMG 453
           H P  +R  + +   ++  PRGS R  R G
Sbjct: 817 HDPQKLRIVVSKSANAMHPPRGS-RHTRQG 845


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 72  HSPSGGPYASSALQGPN 22
           H PS  P+++  L GPN
Sbjct: 95  HHPSSSPHSNHLLGGPN 111


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = -2

Query: 163 LQTRLVESIKQKAAAWLCPWHC*SPWATGTPLTIRWAVCFVCPTRA 26
           + TR   S  + A A  CP  C S W+  + +    A    C TR+
Sbjct: 45  VMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRCAPARTASCSTRS 90


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 364 HSPWNIRYKIQREPKSL 414
           H PWN    +QR  K L
Sbjct: 445 HEPWNASESVQRAAKCL 461


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 429 LQTIRENGIIDNPNG 473
           LQT  ENG   NPNG
Sbjct: 303 LQTFDENGRNGNPNG 317


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 489 VKWKKLVLGAPAQRWEQYF 545
           V+W   +LG PA+R E+Y+
Sbjct: 216 VEWD--ILGVPAERHEKYY 232


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 134 TEGSGLALPLALLKSMGDGYPTHHQVGR 51
           T GSG  LPL + +++       H VG+
Sbjct: 240 TSGSGSGLPLLVQRTIAKQIQMVHSVGK 267


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 429 LQTIRENGIIDNPNG 473
           LQT  ENG   NPNG
Sbjct: 156 LQTFDENGRNGNPNG 170


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 429 LQTIRENGIIDNPNG 473
           LQT  ENG   NPNG
Sbjct: 303 LQTFDENGRNGNPNG 317


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 502 SWFWEPRPKDGSSTSREAGLVLYKAKPL 585
           +W  E RP DG   SR  G+V+  A  L
Sbjct: 131 AWGMERRPNDGERVSR-GGVVMDAAAAL 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 916,218
Number of Sequences: 2352
Number of extensions: 22151
Number of successful extensions: 44
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)