Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0207
(713 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC016967-1|AAH16967.2| 545|Homo sapiens RNA pseudouridylate syn... 34 0.44
BC007697-1|AAH07697.1| 554|Homo sapiens RPUSD2 protein protein. 34 0.44
AK055971-1|BAB71059.1| 545|Homo sapiens protein ( Homo sapiens ... 34 0.44
DQ267419-1|ABB83336.1| 250|Homo sapiens kallikrein 9 protein. 32 1.8
AF243527-10|AAG33362.1| 250|Homo sapiens kallikrein-like 3 prot... 32 1.8
AF135026-2|AAD26427.2| 250|Homo sapiens kallikrein-like protein... 32 1.8
AC011473-2|AAG23255.1| 250|Homo sapiens kallikrein 9 protein. 32 1.8
Y13620-1|CAA73942.1| 1394|Homo sapiens B-cell CLL/lymphoma 9 pro... 30 7.2
BC116451-1|AAI16452.1| 1426|Homo sapiens B-cell CLL/lymphoma 9 p... 30 7.2
AL359207-1|CAI15198.1| 1426|Homo sapiens B-cell CLL/lymphoma 9 p... 30 7.2
>BC016967-1|AAH16967.2| 545|Homo sapiens RNA pseudouridylate
synthase domain containing 2 protein.
Length = 545
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -3
Query: 111 APGIAEVHGRRVPHSPSGGPYASSALQGPNKKKKKK 4
+PG + GR V +P GG + S+A GP K KK++
Sbjct: 68 SPGPPKPAGREVEPAPVGGEHPSAAAPGPGKHKKRR 103
>BC007697-1|AAH07697.1| 554|Homo sapiens RPUSD2 protein protein.
Length = 554
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -3
Query: 111 APGIAEVHGRRVPHSPSGGPYASSALQGPNKKKKKK 4
+PG + GR V +P GG + S+A GP K KK++
Sbjct: 77 SPGPPKPAGREVEPAPVGGEHPSAAAPGPGKHKKRR 112
>AK055971-1|BAB71059.1| 545|Homo sapiens protein ( Homo sapiens
cDNA FLJ31409 fis, clone NT2NE2000174. ).
Length = 545
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -3
Query: 111 APGIAEVHGRRVPHSPSGGPYASSALQGPNKKKKKK 4
+PG + GR V +P GG + S+A GP K KK++
Sbjct: 68 SPGPPKPAGREVEPAPVGGEHPSAAAPGPGKHKKRR 103
>DQ267419-1|ABB83336.1| 250|Homo sapiens kallikrein 9 protein.
Length = 250
Score = 32.3 bits (70), Expect = 1.8
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 317 RTARHRSRVHPYYLGPLRSSTCVSRGLFCHVPSGYG-MSSPPRCFPSAMTC 168
R AR V P L S TCVS G+ C + SG+G +SSP FP + C
Sbjct: 119 RQARLSPAVQPLNL----SQTCVSPGMQCLI-SGWGAVSSPKALFPVTLQC 164
>AF243527-10|AAG33362.1| 250|Homo sapiens kallikrein-like 3
protein.
Length = 250
Score = 32.3 bits (70), Expect = 1.8
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 317 RTARHRSRVHPYYLGPLRSSTCVSRGLFCHVPSGYG-MSSPPRCFPSAMTC 168
R AR V P L S TCVS G+ C + SG+G +SSP FP + C
Sbjct: 119 RQARLSPAVQPLNL----SQTCVSPGMQCLI-SGWGAVSSPKALFPVTLQC 164
>AF135026-2|AAD26427.2| 250|Homo sapiens kallikrein-like protein 3
protein.
Length = 250
Score = 32.3 bits (70), Expect = 1.8
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 317 RTARHRSRVHPYYLGPLRSSTCVSRGLFCHVPSGYG-MSSPPRCFPSAMTC 168
R AR V P L S TCVS G+ C + SG+G +SSP FP + C
Sbjct: 119 RQARLSPAVQPLNL----SQTCVSPGMQCLI-SGWGAVSSPKALFPVTLQC 164
>AC011473-2|AAG23255.1| 250|Homo sapiens kallikrein 9 protein.
Length = 250
Score = 32.3 bits (70), Expect = 1.8
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 317 RTARHRSRVHPYYLGPLRSSTCVSRGLFCHVPSGYG-MSSPPRCFPSAMTC 168
R AR V P L S TCVS G+ C + SG+G +SSP FP + C
Sbjct: 119 RQARLSPAVQPLNL----SQTCVSPGMQCLI-SGWGAVSSPKALFPVTLQC 164
>Y13620-1|CAA73942.1| 1394|Homo sapiens B-cell CLL/lymphoma 9
protein.
Length = 1394
Score = 30.3 bits (65), Expect = 7.2
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 272 APGSMDELYSGGGRCDGKNEMPVSSRTIPQSTPHGTYGTKY-RGNRSPSADPEAPNDP 442
+PG ++L G +P T P STP+ T +G+ S SADP+AP P
Sbjct: 278 SPGVENKLIPSVGSPASSTPLPPDG-TGPNSTPNNRAVTPVSQGSNSSSADPKAPPPP 334
>BC116451-1|AAI16452.1| 1426|Homo sapiens B-cell CLL/lymphoma 9
protein.
Length = 1426
Score = 30.3 bits (65), Expect = 7.2
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 272 APGSMDELYSGGGRCDGKNEMPVSSRTIPQSTPHGTYGTKY-RGNRSPSADPEAPNDP 442
+PG ++L G +P T P STP+ T +G+ S SADP+AP P
Sbjct: 278 SPGVENKLIPSVGSPASSTPLPPDG-TGPNSTPNNRAVTPVSQGSNSSSADPKAPPPP 334
>AL359207-1|CAI15198.1| 1426|Homo sapiens B-cell CLL/lymphoma 9
protein.
Length = 1426
Score = 30.3 bits (65), Expect = 7.2
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 272 APGSMDELYSGGGRCDGKNEMPVSSRTIPQSTPHGTYGTKY-RGNRSPSADPEAPNDP 442
+PG ++L G +P T P STP+ T +G+ S SADP+AP P
Sbjct: 278 SPGVENKLIPSVGSPASSTPLPPDG-TGPNSTPNNRAVTPVSQGSNSSSADPKAPPPP 334
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,359,760
Number of Sequences: 237096
Number of extensions: 3653086
Number of successful extensions: 10510
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10505
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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