Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0206
         (678 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    49   1e-04
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    48   3e-04
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    47   4e-04
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    46   6e-04
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    44   0.003
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    40   0.074
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:...    36   0.91 
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j...    33   4.8  
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    33   6.4  

>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 48.8 bits (111), Expect = 1e-04
 Identities = 23/35 (65%), Positives = 25/35 (71%)
 Frame = +1

Query: 574 YPIRPIVSRITIHWPVVLQRRDWENPGVTQLNRLA 678
           YP+   +S       VVLQRRDWENPGVTQLNRLA
Sbjct: 55  YPLVKALSESYYGLAVVLQRRDWENPGVTQLNRLA 89


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 47.6 bits (108), Expect = 3e-04
 Identities = 22/29 (75%), Positives = 24/29 (82%)
 Frame = +1

Query: 592 VSRITIHWPVVLQRRDWENPGVTQLNRLA 678
           ++ IT    VVLQRRDWENPGVTQLNRLA
Sbjct: 1   MTMITDSLAVVLQRRDWENPGVTQLNRLA 29


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 21/34 (61%), Positives = 24/34 (70%)
 Frame = +1

Query: 577 PIRPIVSRITIHWPVVLQRRDWENPGVTQLNRLA 678
           P+       ++   VVLQRRDWENPGVTQLNRLA
Sbjct: 14  PLESTCRHASLALAVVLQRRDWENPGVTQLNRLA 47


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 46.4 bits (105), Expect = 6e-04
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = +1

Query: 619 VVLQRRDWENPGVTQLNRLA 678
           VVLQRRDWENPGVTQLNRLA
Sbjct: 24  VVLQRRDWENPGVTQLNRLA 43


>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = +2

Query: 617 PSFYNVVTGKTLALPNLIAL 676
           PSFYNVVTGKTLALPNLIAL
Sbjct: 7   PSFYNVVTGKTLALPNLIAL 26


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 39.5 bits (88), Expect = 0.074
 Identities = 18/22 (81%), Positives = 18/22 (81%)
 Frame = +1

Query: 541 YRRLTARGGARYPIRPIVSRIT 606
           YR    RGGARYPIRPIVSRIT
Sbjct: 254 YRYRRPRGGARYPIRPIVSRIT 275


>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
           Beta-galactosidase - Yersinia pseudotuberculosis
          Length = 1066

 Score = 35.9 bits (79), Expect = 0.91
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 598 RITIHWPVVLQRRDWENPGVTQLNRL 675
           ++ +  P +L RRDWENP +TQ +RL
Sbjct: 10  QVQLSLPQILSRRDWENPQITQYHRL 35


>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09076 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 109

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = +1

Query: 550 LTARGGARYPIRPIVSRITIHWPVVLQRRDWENPGVTQLNRL 675
           L+  GGAR PI P      I     L+RR+ +NPG  QLN L
Sbjct: 35  LSNPGGARDPISPKGGPNKISGAAFLKRREGKNPGCPQLNPL 76


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -3

Query: 601 YDSL*GELGTGPPLE 557
           YDSL GELGTGPPLE
Sbjct: 278 YDSLYGELGTGPPLE 292


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,248,358
Number of Sequences: 1657284
Number of extensions: 9565810
Number of successful extensions: 18697
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18693
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)