Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0204
(714 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 186 2e-47
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 186 2e-47
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 186 2e-47
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 186 2e-47
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 177 5e-45
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 177 5e-45
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 176 1e-44
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 176 1e-44
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 173 1e-43
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 173 1e-43
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 173 1e-43
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 170 7e-43
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 169 2e-42
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 165 3e-41
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 165 4e-41
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 165 4e-41
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 106 2e-23
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 106 2e-23
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 105 2e-23
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 103 1e-22
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 102 3e-22
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 102 3e-22
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 91 5e-19
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 91 5e-19
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 58 8e-09
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 58 8e-09
Z92830-7|CAB07360.1| 659|Caenorhabditis elegans Hypothetical pr... 30 1.9
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 28 5.8
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 28 5.8
AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical ... 28 5.8
AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical ... 28 5.8
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 5.8
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 7.6
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 7.6
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 7.6
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 7.6
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 7.6
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 7.6
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 7.6
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 7.6
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 186 bits (452), Expect = 2e-47
Identities = 92/164 (56%), Positives = 101/164 (61%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTARSLNWX 580
TIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGGG G + +
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 168
Query: 581 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 712
DC+FMVDNEAIYDI
Sbjct: 169 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDI 212
Score = 123 bits (296), Expect = 1e-28
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 258 TYP 266
P
Sbjct: 61 HVP 63
Score = 86.2 bits (204), Expect = 2e-17
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFI 639
+GSGFTSLLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYN I
Sbjct: 145 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSI 188
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 186 bits (452), Expect = 2e-47
Identities = 92/164 (56%), Positives = 101/164 (61%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 48 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 107
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTARSLNWX 580
TIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGGG G + +
Sbjct: 108 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 167
Query: 581 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 712
DC+FMVDNEAIYDI
Sbjct: 168 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDI 211
Score = 121 bits (291), Expect = 6e-28
Identities = 50/62 (80%), Positives = 57/62 (91%)
Frame = +3
Query: 81 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 260
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 261 YP 266
P
Sbjct: 61 VP 62
Score = 86.2 bits (204), Expect = 2e-17
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFI 639
+GSGFTSLLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYN I
Sbjct: 144 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSI 187
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 186 bits (452), Expect = 2e-47
Identities = 92/164 (56%), Positives = 101/164 (61%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTARSLNWX 580
TIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGGG G + +
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 168
Query: 581 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 712
DC+FMVDNEAIYDI
Sbjct: 169 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDI 212
Score = 123 bits (296), Expect = 1e-28
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 258 TYP 266
P
Sbjct: 61 HVP 63
Score = 86.2 bits (204), Expect = 2e-17
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFI 639
+GSGFTSLLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYN I
Sbjct: 145 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSI 188
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 186 bits (452), Expect = 2e-47
Identities = 92/164 (56%), Positives = 101/164 (61%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTARSLNWX 580
TIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGGG G + +
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 168
Query: 581 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 712
DC+FMVDNEAIYDI
Sbjct: 169 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDI 212
Score = 123 bits (296), Expect = 1e-28
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 258 TYP 266
P
Sbjct: 61 HVP 63
Score = 86.2 bits (204), Expect = 2e-17
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFI 639
+GSGFTSLLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYN I
Sbjct: 145 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSI 188
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 177 bits (432), Expect = 5e-45
Identities = 86/164 (52%), Positives = 102/164 (62%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F S ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTARSLNWX 580
T+GKE++D VLDRIR+LAD C+GLQGF +FHSFGGG G + +
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 581 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 712
DCAFMVDNEAIYDI
Sbjct: 167 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 210
Score = 103 bits (248), Expect = 1e-22
Identities = 47/63 (74%), Positives = 51/63 (80%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 87.4 bits (207), Expect = 9e-18
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFI 639
+GSGFTSLLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYN I
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 177 bits (432), Expect = 5e-45
Identities = 86/164 (52%), Positives = 102/164 (62%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F S ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTARSLNWX 580
T+GKE++D VLDRIR+LAD C+GLQGF +FHSFGGG G + +
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 581 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 712
DCAFMVDNEAIYDI
Sbjct: 167 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 210
Score = 103 bits (248), Expect = 1e-22
Identities = 47/63 (74%), Positives = 51/63 (80%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 87.4 bits (207), Expect = 9e-18
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFI 639
+GSGFTSLLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYN I
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 176 bits (429), Expect = 1e-44
Identities = 85/164 (51%), Positives = 102/164 (62%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F + ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTARSLNWX 580
T+GKE++D VLDRIR+LAD C+GLQGF +FHSFGGG G + +
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 581 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 712
DCAFMVDNEAIYDI
Sbjct: 167 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 210
Score = 102 bits (245), Expect = 2e-22
Identities = 46/63 (73%), Positives = 51/63 (80%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 87.4 bits (207), Expect = 9e-18
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFI 639
+GSGFTSLLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYN I
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 176 bits (429), Expect = 1e-44
Identities = 85/164 (51%), Positives = 102/164 (62%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F + ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTARSLNWX 580
T+GKE++D VLDRIR+LAD C+GLQGF +FHSFGGG G + +
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 581 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 712
DCAFMVDNEAIYDI
Sbjct: 167 FSIYPAPQVCTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 210
Score = 102 bits (245), Expect = 2e-22
Identities = 46/63 (73%), Positives = 51/63 (80%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 85.4 bits (202), Expect = 4e-17
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFI 639
+GSGFTSLLMERLSVDYGKKSKLEF+IYPAPQV TAVVEPYN I
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNSI 186
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 173 bits (420), Expect = 1e-43
Identities = 83/164 (50%), Positives = 100/164 (60%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F + ++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTARSLNWX 580
T+GKE++D LDRIR+LAD C+GLQGF +FHSFGGG G + +
Sbjct: 107 TVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 581 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 712
DCAFMVDNEAIYDI
Sbjct: 167 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 210
Score = 101 bits (242), Expect = 5e-22
Identities = 46/63 (73%), Positives = 51/63 (80%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 87.4 bits (207), Expect = 9e-18
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFI 639
+GSGFTSLLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYN I
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 173 bits (420), Expect = 1e-43
Identities = 82/164 (50%), Positives = 99/164 (60%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F + +HVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHY
Sbjct: 54 FNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHY 113
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTARSLNWX 580
TIGKEI+D+V+DR+R+L + C GLQGFL+FHSFGGG G + +
Sbjct: 114 TIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLE 173
Query: 581 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 712
DC+FMVDNEAIYDI
Sbjct: 174 FCIYPAPQVSTSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDI 217
Score = 104 bits (250), Expect = 5e-23
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = +3
Query: 75 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 254
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 255 STYP 266
P
Sbjct: 65 KHVP 68
Score = 83.4 bits (197), Expect = 1e-16
Identities = 38/44 (86%), Positives = 42/44 (95%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFI 639
+GSGFT+LLMERLSVDYGKKSKLEF IYPAPQVST++VEPYN I
Sbjct: 150 TGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNSI 193
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 173 bits (420), Expect = 1e-43
Identities = 83/164 (50%), Positives = 100/164 (60%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F + ++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTARSLNWX 580
T+GKE++D LDRIR+LAD C+GLQGF +FHSFGGG G + +
Sbjct: 107 TVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 581 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 712
DCAFMVDNEAIYDI
Sbjct: 167 FSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 210
Score = 101 bits (242), Expect = 5e-22
Identities = 46/63 (73%), Positives = 51/63 (80%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 87.4 bits (207), Expect = 9e-18
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFI 639
+GSGFTSLLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYN I
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 170 bits (414), Expect = 7e-43
Identities = 81/164 (49%), Positives = 101/164 (61%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
+ F S +HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHY
Sbjct: 49 YNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHY 108
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTARSLNWX 580
TIGKE++D+V+DR+R+L ++C LQGFLIFHSFGGG G + +
Sbjct: 109 TIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLE 168
Query: 581 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 712
DC+F++DNEAIY+I
Sbjct: 169 FSIYPAPQISTSMVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEI 212
Score = 104 bits (249), Expect = 7e-23
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +G
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 258 TYP 266
P
Sbjct: 61 HVP 63
Score = 81.0 bits (191), Expect = 8e-16
Identities = 34/42 (80%), Positives = 42/42 (100%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 633
+GSGFTSL+MERLS+DYGKK+KLEF+IYPAPQ+ST++VEPYN
Sbjct: 145 TGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEPYN 186
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 169 bits (411), Expect = 2e-42
Identities = 80/153 (52%), Positives = 95/153 (62%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 433
+HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D L
Sbjct: 57 RHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTL 116
Query: 434 DRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXX 613
DRIR+LA+ C GLQGF +FHSFGGG G +
Sbjct: 117 DRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQIST 176
Query: 614 XXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 712
DC+FMVDNEAIYDI
Sbjct: 177 SVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDI 209
Score = 88.6 bits (210), Expect = 4e-18
Identities = 42/63 (66%), Positives = 44/63 (69%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 258 TYP 266
P
Sbjct: 58 HVP 60
Score = 81.8 bits (193), Expect = 4e-16
Identities = 36/44 (81%), Positives = 42/44 (95%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFI 639
+GSGFTS+LMERLS +YGKKSKLEF+IYPAPQ+ST+VVEPYN I
Sbjct: 142 TGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPYNSI 185
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 165 bits (401), Expect = 3e-41
Identities = 79/163 (48%), Positives = 96/163 (58%)
Frame = +2
Query: 224 QHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 403
Q F + +HVPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYT
Sbjct: 53 QAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYT 112
Query: 404 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTARSLNWXX 583
IGKE++D+VLDRIRK + C GLQGFL+FHSFGGG G + +
Sbjct: 113 IGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEF 172
Query: 584 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 712
DC+FMVDNEAIYD+
Sbjct: 173 SVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIYDL 215
Score = 81.0 bits (191), Expect = 8e-16
Identities = 36/44 (81%), Positives = 43/44 (97%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFI 639
+GSGF+SLLMERLSV++GKKSKLEF++YPAPQVST+VVEPYN I
Sbjct: 148 TGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSI 191
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/62 (50%), Positives = 40/62 (64%)
Frame = +3
Query: 81 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 260
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ G
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 261 YP 266
P
Sbjct: 65 VP 66
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 165 bits (400), Expect = 4e-41
Identities = 81/161 (50%), Positives = 96/161 (59%)
Frame = +2
Query: 230 FLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 409
F +HVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG
Sbjct: 58 FFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIG 117
Query: 410 KEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTARSLNWXXXX 589
+E++D+V+DR+++LA+ C GLQGF+IFHSFGGG G L +
Sbjct: 118 REMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAI 177
Query: 590 XXXXXXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 712
DC FMVDNEAIYDI
Sbjct: 178 YPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDI 218
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +3
Query: 81 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 260
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET G
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 261 YP 266
P
Sbjct: 68 VP 69
Score = 78.6 bits (185), Expect = 4e-15
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFI 639
+GSGF SLLMERLS +YGKK KLEFAIYPAPQVST++VEPYN I
Sbjct: 151 TGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSI 194
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 165 bits (400), Expect = 4e-41
Identities = 81/161 (50%), Positives = 96/161 (59%)
Frame = +2
Query: 230 FLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 409
F +HVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG
Sbjct: 30 FFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIG 89
Query: 410 KEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTARSLNWXXXX 589
+E++D+V+DR+++LA+ C GLQGF+IFHSFGGG G L +
Sbjct: 90 REMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAI 149
Query: 590 XXXXXXXXXXXXXXXXXXXXXXXXXXXDCAFMVDNEAIYDI 712
DC FMVDNEAIYDI
Sbjct: 150 YPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDI 190
Score = 78.6 bits (185), Expect = 4e-15
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFI 639
+GSGF SLLMERLS +YGKK KLEFAIYPAPQVST++VEPYN I
Sbjct: 123 TGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSI 166
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3
Query: 144 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 266
++CLEHGIQPDG D T ++ NTFF+ET G P
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVP 41
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 106 bits (254), Expect = 2e-23
Identities = 49/89 (55%), Positives = 62/89 (69%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 433
++VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 434 DRIRKLADQCTGLQGFLIFHSFGGGPALG 520
D IRK A+ C LQGF + HS GGG G
Sbjct: 118 DVIRKEAEGCDCLQGFQLTHSLGGGTGSG 146
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E G
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDL--QLERIDVYYNEANNGK 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 633
+GSG +LL+ ++ ++ + F++ P+P+VS VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEPYN 184
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 106 bits (254), Expect = 2e-23
Identities = 49/89 (55%), Positives = 62/89 (69%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 433
++VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 434 DRIRKLADQCTGLQGFLIFHSFGGGPALG 520
D IRK A+ C LQGF + HS GGG G
Sbjct: 118 DVIRKEAEGCDCLQGFQLTHSLGGGTGSG 146
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E G
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDL--QLERIDVYYNEANNGK 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 633
+GSG +LL+ ++ +Y + F++ P+P+VS VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYN 184
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 105 bits (253), Expect = 2e-23
Identities = 48/89 (53%), Positives = 62/89 (69%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 433
++VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 434 DRIRKLADQCTGLQGFLIFHSFGGGPALG 520
D +RK A+ C LQGF + HS GGG G
Sbjct: 118 DVVRKEAEGCDCLQGFQLTHSLGGGTGSG 146
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E G
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 633
+GSG +LL+ ++ +Y + F++ P+P+VS VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYN 184
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 103 bits (248), Expect = 1e-22
Identities = 47/89 (52%), Positives = 60/89 (67%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 433
++VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 434 DRIRKLADQCTGLQGFLIFHSFGGGPALG 520
D +RK A+ C LQGF + HS GGG G
Sbjct: 118 DVVRKEAESCDCLQGFQMTHSLGGGTGSG 146
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 633
+GSG +LL+ ++ +Y + + F++ P+P+VS VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYN 184
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 102 bits (244), Expect = 3e-22
Identities = 47/89 (52%), Positives = 61/89 (68%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 433
++VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 434 DRIRKLADQCTGLQGFLIFHSFGGGPALG 520
D +RK A+ LQGF + HS GGG G
Sbjct: 118 DVVRKEAESTDCLQGFQLTHSLGGGTGSG 146
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 633
+GSG +LL+ ++ +Y + F++ P+P+VS VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYN 184
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 102 bits (244), Expect = 3e-22
Identities = 47/89 (52%), Positives = 61/89 (68%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 433
++VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 434 DRIRKLADQCTGLQGFLIFHSFGGGPALG 520
D +RK A+ LQGF + HS GGG G
Sbjct: 118 DVVRKEAESTDCLQGFQLTHSLGGGTGSG 146
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 633
+GSG +LL+ ++ +Y + F++ P+P+VS VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYN 184
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 91.5 bits (217), Expect = 5e-19
Identities = 44/93 (47%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 433
++VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVL 117
Query: 434 DRIRKLADQCTGLQGFLIFHSFGG--GPALGSL 526
IR+ A+ L+GF + HS GG G LGSL
Sbjct: 118 SVIRREAEAADSLEGFQLIHSLGGGTGSGLGSL 150
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 194
M+E I+V VGQ G QIG WE EHG+Q DG D
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFI 639
+GSG SLL+ +L +Y K+ +I P+ +VS VVEPYN I
Sbjct: 143 TGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAI 186
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 91.5 bits (217), Expect = 5e-19
Identities = 44/93 (47%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 433
++VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVL 117
Query: 434 DRIRKLADQCTGLQGFLIFHSFGG--GPALGSL 526
IR+ A+ L+GF + HS GG G LGSL
Sbjct: 118 SVIRREAEAADSLEGFQLIHSLGGGTGSGLGSL 150
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 194
M+E I+V VGQ G QIG WE EHG+Q DG D
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFI 639
+GSG SLL+ +L +Y K+ +I P+ +VS VVEPYN I
Sbjct: 143 TGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAI 186
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 57.6 bits (133), Expect = 8e-09
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Frame = +2
Query: 230 FLQRDRSWQHVPRAVFVDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHY 400
F Q D +VPRAV VDLEP V++ + ++ + LF+ + + A NN+A G Y
Sbjct: 53 FYQADDD-HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-Y 110
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGS 523
G+E+ + ++D I + A+ L G L HS GG G+
Sbjct: 111 CQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGT 151
Score = 34.7 bits (76), Expect = 0.066
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 90 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 182
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
Score = 34.3 bits (75), Expect = 0.088
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVST-AVVEPYNFI 639
+GSG SLL+ERL + KK ++++ ST VV PYN++
Sbjct: 147 TGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWV 191
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 57.6 bits (133), Expect = 8e-09
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Frame = +2
Query: 230 FLQRDRSWQHVPRAVFVDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHY 400
F Q D +VPRAV VDLEP V++ + ++ + LF+ + + A NN+A G Y
Sbjct: 53 FYQADDD-HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-Y 110
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGS 523
G+E+ + ++D I + A+ L G L HS GG G+
Sbjct: 111 CQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGT 151
Score = 34.7 bits (76), Expect = 0.066
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 90 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 182
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
Score = 34.3 bits (75), Expect = 0.088
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVST-AVVEPYNFI 639
+GSG SLL+ERL + KK ++++ ST VV PYN++
Sbjct: 147 TGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWV 191
>Z92830-7|CAB07360.1| 659|Caenorhabditis elegans Hypothetical
protein F11A5.8 protein.
Length = 659
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 487 LPLLRWRSGSGFTSL-LMERLSVDYGKKSK 573
+PL W+ G+GF +L L E ++VD KKSK
Sbjct: 195 MPLRLWQFGAGFVALFLREVITVDSVKKSK 224
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = -1
Query: 597 RGVDGELQFRLLAVVNGETLHQ*GSEPRAGPPPKEWKIRNPCRPVHWSASLRILSKTK 424
R +D EL+ R AV +GE + + EP+ PKE K + P + S+ R++ K K
Sbjct: 841 RELDNELE-RCEAVHSGEKIKK-VKEPKPPKQPKEKKEKPPPKKKEMSSRDRLMKKLK 896
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = -1
Query: 597 RGVDGELQFRLLAVVNGETLHQ*GSEPRAGPPPKEWKIRNPCRPVHWSASLRILSKTK 424
R +D EL+ R AV +GE + + EP+ PKE K + P + S+ R++ K K
Sbjct: 854 RELDNELE-RCEAVHSGEKIKK-VKEPKPPKQPKEKKEKPPPKKKEMSSRDRLMKKLK 909
>AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical
protein T21D12.9c protein.
Length = 737
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 248 SWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 355
SW H P+ ++ L + + +G++R L E+LI
Sbjct: 310 SWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELI 345
>AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical
protein T21D12.9a protein.
Length = 881
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 248 SWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 355
SW H P+ ++ L + + +G++R L E+LI
Sbjct: 310 SWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELI 345
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 367 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 272
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 296 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 439
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 296 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 439
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 296 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 439
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 296 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 439
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 296 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 439
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 296 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 439
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 296 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 439
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 296 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 439
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,059,409
Number of Sequences: 27780
Number of extensions: 382094
Number of successful extensions: 1089
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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