Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0204
         (714 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.94 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.94 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.6  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   2.9  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.8  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   3.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   3.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   3.8  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    22   6.6  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   8.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   8.8  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 470 LQGFLIFHSFGGGPALGS 523
           L+G +I HS+GGG   GS
Sbjct: 656 LRGSIIDHSYGGGFGFGS 673


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 470 LQGFLIFHSFGGGPALGS 523
           L+G +I HS+GGG   GS
Sbjct: 694 LRGSIIDHSYGGGFGFGS 711


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 516 RAGPPPKEWKIRNPC 472
           R  PPP++WK  + C
Sbjct: 413 RTSPPPEDWKPLDKC 427


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 233 LQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQL 334
           L+  R+  H+    + D+EPTV         RQL
Sbjct: 234 LEERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQL 267


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 141 PSRHYRSGLR 112
           P RHYRSGL+
Sbjct: 139 PLRHYRSGLK 148


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 204 RWSCLWASGHQAGCRAPGSKAPSRHYR 124
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 204 RWSCLWASGHQAGCRAPGSKAPSRHYR 124
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 204 RWSCLWASGHQAGCRAPGSKAPSRHYR 124
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 175 MARCPQTRPSGVETILSTLSSARPE 249
           +A+ P      + T+ ST+SSA+PE
Sbjct: 7   VAQLPHHLSPNMPTMDSTVSSAKPE 31


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 487 LPLLRWRSGSGFTS 528
           LPLL W  G GF S
Sbjct: 158 LPLLVWIYGGGFMS 171


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 487 LPLLRWRSGSGFTS 528
           LPLL W  G GF S
Sbjct: 158 LPLLVWIYGGGFMS 171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,585
Number of Sequences: 438
Number of extensions: 5142
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)