Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0202
         (731 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XMN4 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_Q7RE50 Cluster: Synthetic antigen of P.falciparum, puta...    33   9.5  
UniRef50_Q23RC4 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  
UniRef50_Q22TZ9 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  

>UniRef50_Q4XMN4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 97

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
 Frame = -3

Query: 393 LMLVTHNRRDIYSFCIFKDIPMNLPSIEFISNKYL-----HMYIIL*YRNIF 253
           +++V +N+  +Y+ C F  IP  +P I++I N ++     HMYII  Y N++
Sbjct: 3   MIIVKYNKPLLYTHCSFPWIPSIVP-IKYIRNFFIFFSHTHMYIICIYPNLY 53


>UniRef50_Q7RE50 Cluster: Synthetic antigen of P.falciparum,
           putative; n=1; Plasmodium yoelii yoelii|Rep: Synthetic
           antigen of P.falciparum, putative - Plasmodium yoelii
           yoelii
          Length = 623

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +2

Query: 281 YICRYLLEINSIDGRFIGMSLKIQNEYMSRLLCVTSINYYV 403
           YI  YL++I SIDG +   S KI+   +  ++ + S NYYV
Sbjct: 575 YILIYLIDILSIDGVYFLSSWKIKTSILKTIIALIS-NYYV 614


>UniRef50_Q23RC4 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2461

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = +2

Query: 254  NIFLYYNIIYICRYLLEINSIDGRFIGMSLKIQNEYMSRLLC--VTSINYYVK*PNRHAY 427
            +IF+YYN  Y+ +  L   S   + I + LK  N Y +  LC  +   N+ ++  + + +
Sbjct: 1353 DIFMYYNQNYLEKGGLSRMSFSHQVIDLELKKNNYYSNSRLCLLIPDCNFSIEQTSNNYF 1412

Query: 428  KNCTHQLTRS 457
            +  T QL  S
Sbjct: 1413 ETKTQQLESS 1422


>UniRef50_Q22TZ9 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 820

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
 Frame = +1

Query: 4   LYAQLCIITIIISTLQYVVCYH---YSVINSYIYYRYKYAFIQNLSIS*TAFC 153
           ++A LC  T++IS +  ++ Y+   Y + N Y  Y YK   +Q   +S  + C
Sbjct: 641 IHAFLCTYTLLISLVFLIIIYYSCKYMLFNQYSIYNYKTLSLQRKFLSTYSVC 693


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,666,809
Number of Sequences: 1657284
Number of extensions: 9835306
Number of successful extensions: 21000
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20939
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)