Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0202
         (731 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100305-8|AAC68919.1|  179|Caenorhabditis elegans Hypothetical ...    30   1.5  
AF099915-1|AAC68771.1|  460|Caenorhabditis elegans Hypothetical ...    30   1.5  
AF039720-11|AAK68359.1|  260|Caenorhabditis elegans Hypothetical...    30   1.9  
U51999-3|AAA96084.1|  306|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AL021479-1|CAA16321.2|  346|Caenorhabditis elegans Hypothetical ...    29   2.6  
AF026202-6|AAB71245.2|  594|Caenorhabditis elegans Hypothetical ...    28   7.8  

>AF100305-8|AAC68919.1|  179|Caenorhabditis elegans Hypothetical
           protein W04B5.6 protein.
          Length = 179

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -2

Query: 217 LISVVLNVCMYVRTDVTIAIFCKMLFMKLINF 122
           + +VV  VC Y+ T+V++AI C  LFM  ++F
Sbjct: 1   MTTVVQKVC-YISTNVSLAIICTALFMFSMHF 31


>AF099915-1|AAC68771.1|  460|Caenorhabditis elegans Hypothetical
           protein E02H9.6 protein.
          Length = 460

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -2

Query: 217 LISVVLNVCMYVRTDVTIAIFCKMLFMKLINF 122
           + +VV  VC Y+ T+V++AI C  LFM  ++F
Sbjct: 1   MTTVVQKVC-YISTNVSLAIICTALFMFSMHF 31


>AF039720-11|AAK68359.1|  260|Caenorhabditis elegans Hypothetical
           protein F33D11.12 protein.
          Length = 260

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = -1

Query: 212 FSCLKCVYVRTD*RHHSNILQNAVHEIDKFC 120
           + C KC  ++ D  HH ++ +  +  +D  C
Sbjct: 84  YKCQKCASIKPDRAHHCSVCERCIRRMDHHC 114


>U51999-3|AAA96084.1|  306|Caenorhabditis elegans Hypothetical
           protein C43H6.7 protein.
          Length = 306

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 206 CLKCVYVRTD*RHHSNILQNAVHEIDKFCI 117
           C KC Y ++D  HH ++ +  V  +D  CI
Sbjct: 105 CSKCNYWKSDNAHHCSVCEKCVLGMDHHCI 134


>AL021479-1|CAA16321.2|  346|Caenorhabditis elegans Hypothetical
           protein Y22F5A.2 protein.
          Length = 346

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 22  IITIIISTLQ-YVVCYHYSVINSYIYYRYKYAFI 120
           +I+  I++   Y++CYH+ +I+ Y YY   +  I
Sbjct: 22  VISFFINSFGVYLICYHHGMIDDYRYYLLYFQII 55


>AF026202-6|AAB71245.2|  594|Caenorhabditis elegans Hypothetical
           protein C10E2.6 protein.
          Length = 594

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 45  LTICCLLPLFCYQQLHILPL 104
           LTIC LL +FCYQ    +PL
Sbjct: 475 LTICGLLTVFCYQFNGFIPL 494


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,057,274
Number of Sequences: 27780
Number of extensions: 259544
Number of successful extensions: 579
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)