Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0200
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical pr...    51   8e-07
AL132948-42|CAN86925.1|  131|Caenorhabditis elegans Hypothetical...    30   1.2  
AL132948-41|CAC51075.1|  129|Caenorhabditis elegans Hypothetical...    30   1.2  
AF067943-1|AAC17662.2|  322|Caenorhabditis elegans Serpentine re...    28   6.6  
Z66523-7|CAA91416.2|  409|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical
           protein R05G6.7 protein.
          Length = 283

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 31/105 (29%), Positives = 50/105 (47%)
 Frame = -3

Query: 625 LHTNVDNGKDFGRVQSTKRYLTSWTAGVSMKWTAGLG*HLFEVGAKYALDQDASLHAKIN 446
           LH+ V N  DFG      +  ++   G  + W  G     + +  KYA  +D ++ AK+N
Sbjct: 180 LHSFVINSTDFG-ASLYHKVASNVEVGTQLGWKVGGNGADYALATKYAPSRDLTVRAKVN 238

Query: 445 NKSLIGLGYQQKLRPGVTLTLSAAIDGQNFNAGGHKVGVALELEP 311
           + S + +     L P + LTLS   +    +A  HK G+ LE +P
Sbjct: 239 SSSQVAVAATHSLSPALKLTLSTQFNLAANDA--HKFGLGLEFDP 281


>AL132948-42|CAN86925.1|  131|Caenorhabditis elegans Hypothetical
           protein Y39B6A.3b protein.
          Length = 131

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = -3

Query: 463 LHAKINNKSLIGLGYQQKLRPGVTLTLSAAIDGQNFNAGGHKVGVALELEP 311
           L A+ N+ + + +G +QK   G+T TL  A D Q F+    + G+ + +EP
Sbjct: 40  LLAQQNDANALKIGVRQKGCNGLTYTLEYAKDKQKFDEEVEQDGIKVWIEP 90


>AL132948-41|CAC51075.1|  129|Caenorhabditis elegans Hypothetical
           protein Y39B6A.3a protein.
          Length = 129

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = -3

Query: 463 LHAKINNKSLIGLGYQQKLRPGVTLTLSAAIDGQNFNAGGHKVGVALELEP 311
           L A+ N+ + + +G +QK   G+T TL  A D Q F+    + G+ + +EP
Sbjct: 38  LLAQQNDANALKIGVRQKGCNGLTYTLEYAKDKQKFDEEVEQDGIKVWIEP 88


>AF067943-1|AAC17662.2|  322|Caenorhabditis elegans Serpentine
           receptor, class x protein93 protein.
          Length = 322

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +2

Query: 209 IHVISTILIDSLYTLLVVIT--VCIYLQE*VWLYFLG 313
           ++ I TIL+DSLY + +  T  +  +    VW YF G
Sbjct: 229 LNFIQTILLDSLYLIDITFTFELSSWSTRRVWTYFCG 265


>Z66523-7|CAA91416.2|  409|Caenorhabditis elegans Hypothetical
           protein M05D6.7 protein.
          Length = 409

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
 Frame = +1

Query: 193 ERSGHYTRNFYDT-D*FSIHAVGCDNSMYLSTRVGLVIF--------SRARVRGQRQPCG 345
           E S   T  FY+  + FS      DNS+ +S R G VIF        SR   +G RQ CG
Sbjct: 326 EASAAETIKFYEAYEKFSKICHNPDNSIEISLRPGSVIFIDNFRILHSRTSFQGYRQMCG 385


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,124,182
Number of Sequences: 27780
Number of extensions: 320077
Number of successful extensions: 731
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)