Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0196
         (410 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VVJ7 Cluster: CG7484-PB; n=11; Endopterygota|Rep: CG7...    58   5e-08
UniRef50_UPI00015B5DBA Cluster: PREDICTED: similar to CG7484; n=...    48   7e-05
UniRef50_O60613 Cluster: 15 kDa selenoprotein precursor; n=29; E...    45   5e-04
UniRef50_Q4PMT2 Cluster: Salivary selenoprotein; n=1; Ixodes sca...    43   0.002
UniRef50_Q6F4N0 Cluster: Putative uncharacterized protein; n=1; ...    35   0.56 
UniRef50_Q1H537 Cluster: At5g18660; n=9; Viridiplantae|Rep: At5g...    33   1.7  
UniRef50_Q9N4C6 Cluster: Putative uncharacterized protein; n=2; ...    33   2.3  
UniRef50_Q6CR01 Cluster: Kluyveromyces lactis strain NRRL Y-1140...    31   9.1  

>UniRef50_Q9VVJ7 Cluster: CG7484-PB; n=11; Endopterygota|Rep:
           CG7484-PB - Drosophila melanogaster (Fruit fly)
          Length = 178

 Score = 58.4 bits (135), Expect = 5e-08
 Identities = 27/60 (45%), Positives = 37/60 (61%)
 Frame = +2

Query: 185 CKGCCHSDEITFKEKKYARALLQAVHANFQRIHKSRLS*KVTGPAKFPNLQIKYVRGLDP 364
           CK CC  D+    ++ YA+A+L+     F+   + +   +   PAKFPNLQIKYVRGLDP
Sbjct: 56  CKQCCTLDQQPAAQRTYAKAILEVCTCKFRAYPQIQAFIQSGRPAKFPNLQIKYVRGLDP 115



 Score = 49.2 bits (112), Expect = 3e-05
 Identities = 24/72 (33%), Positives = 39/72 (54%)
 Frame = +1

Query: 112 LKLTLLCSSRDQLKDFSLEQLIRSL*GVLSFR*NHFQRKEIRSSPITSCSCKFPAYSQIQ 291
           +K  L+CSS ++L DF L+ +        +       ++    + +  C+CKF AY QIQ
Sbjct: 32  IKAQLMCSSCEKLDDFGLDTIKPQCKQCCTLDQQPAAQRTYAKAILEVCTCKFRAYPQIQ 91

Query: 292 AFVKSDRPGQIP 327
           AF++S RP + P
Sbjct: 92  AFIQSGRPAKFP 103


>UniRef50_UPI00015B5DBA Cluster: PREDICTED: similar to CG7484; n=2;
           Apocrita|Rep: PREDICTED: similar to CG7484 - Nasonia
           vitripennis
          Length = 155

 Score = 48.0 bits (109), Expect = 7e-05
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
 Frame = +2

Query: 71  AEFSTKNWASLGFY*S*PYFALRVIN*KILAWNNS*DHCKGCCHSDE--ITFKEKKYARA 244
           +EFS ++  SLG Y             K    N+  + C+ CC  DE       K+Y +A
Sbjct: 21  SEFSAEDCKSLG-YNKATLLCSTCEKFKKFELNDIHEKCQECCLKDEGDDNSSSKRYPKA 79

Query: 245 LLQAVHANFQRIHKSRLS*KVTGPAKFPNLQIKYVRGLDP 364
           +L+     F    + +   K   P K+ NLQI+YVRGLDP
Sbjct: 80  VLEVCTCKFGAYPQIQAFIKSDRPNKYKNLQIRYVRGLDP 119



 Score = 47.6 bits (108), Expect = 1e-04
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
 Frame = +1

Query: 85  KKLGFSRVLLKLTLLCSSRDQLKDFSLEQLIRSL*G--VLSFR*NHFQRKEIRSSPITSC 258
           K LG++    K TLLCS+ ++ K F L  +        +     ++   K    + +  C
Sbjct: 29  KSLGYN----KATLLCSTCEKFKKFELNDIHEKCQECCLKDEGDDNSSSKRYPKAVLEVC 84

Query: 259 SCKFPAYSQIQAFVKSDRPGQ 321
           +CKF AY QIQAF+KSDRP +
Sbjct: 85  TCKFGAYPQIQAFIKSDRPNK 105


>UniRef50_O60613 Cluster: 15 kDa selenoprotein precursor; n=29;
           Eumetazoa|Rep: 15 kDa selenoprotein precursor - Homo
           sapiens (Human)
          Length = 162

 Score = 45.2 bits (102), Expect = 5e-04
 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +2

Query: 185 CKGCCHSDEITFKEKK-YARALLQAVHANFQRIHKSRLS*KVTGPAKFPNLQIKYVRGLD 361
           C+GCC  +E  F+ KK YA A+L+       R  + +   +   P  F  LQIKYVRG D
Sbjct: 67  CRGCCQ-EEAQFETKKLYAGAILEVCGCKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSD 125

Query: 362 P 364
           P
Sbjct: 126 P 126


>UniRef50_Q4PMT2 Cluster: Salivary selenoprotein; n=1; Ixodes
           scapularis|Rep: Salivary selenoprotein - Ixodes
           scapularis (Black-legged tick) (Deer tick)
          Length = 150

 Score = 43.2 bits (97), Expect = 0.002
 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +2

Query: 179 DHCKGCCHSDEITFKEKKYARALLQAVHANFQRIHKSRLS*KVTGPA--KFPNLQIKYVR 352
           D C  CC   +     K+Y RA+L+     F   H  ++   V GP   +FP L IKY+R
Sbjct: 54  DGCHRCCAHTQDRDAPKRYPRAVLEVCACKFG--HMPQIEAFVRGPKHKRFPKLSIKYLR 111

Query: 353 GLDP 364
           G DP
Sbjct: 112 GADP 115


>UniRef50_Q6F4N0 Cluster: Putative uncharacterized protein; n=1;
           Rhodococcus opacus|Rep: Putative uncharacterized protein
           - Rhodococcus opacus (Nocardia opaca)
          Length = 273

 Score = 35.1 bits (77), Expect = 0.56
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -1

Query: 317 PGLSLFTKAWICEYAGNLHEQLVIG-LERISFL 222
           PG+SLF+  W+C   G++HE  V+  LER  +L
Sbjct: 125 PGVSLFSDRWVCMLDGSMHEPAVLARLERDHYL 157


>UniRef50_Q1H537 Cluster: At5g18660; n=9; Viridiplantae|Rep:
           At5g18660 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 417

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = +3

Query: 213 SLSKKRNTLEPYYKLFMQISSVFTNPGFRKK*QARPNSLIFKSNMYVAWTPIIKLLDKGW 392
           SL  KR  L+P   L   IS + T+P FR K     N L+  S  Y+    + +++ +G+
Sbjct: 49  SLKYKRARLKPISSLDSGISEIATSPSFRNKSPKDINVLVVGSTGYIGRFVVKEMIKRGF 108

Query: 393 H 395
           +
Sbjct: 109 N 109


>UniRef50_Q9N4C6 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 152

 Score = 33.1 bits (72), Expect = 2.3
 Identities = 18/67 (26%), Positives = 31/67 (46%)
 Frame = +1

Query: 121 TLLCSSRDQLKDFSLEQLIRSL*GVLSFR*NHFQRKEIRSSPITSCSCKFPAYSQIQAFV 300
           TL C   ++L D+ LE L+         +   F+ ++  ++ +  C C    + Q+QAFV
Sbjct: 38  TLKCGLCERLSDYHLETLLTDCLQCC-IKEEEFKHEKYPTAILEVCECNLARFPQVQAFV 96

Query: 301 KSDRPGQ 321
             D   Q
Sbjct: 97  HKDMARQ 103


>UniRef50_Q6CR01 Cluster: Kluyveromyces lactis strain NRRL Y-1140
           chromosome D of strain NRRL Y- 1140 of Kluyveromyces
           lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
           lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
           1140 of Kluyveromyces lactis - Kluyveromyces lactis
           (Yeast) (Candida sphaerica)
          Length = 1494

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 26/95 (27%), Positives = 43/95 (45%)
 Frame = -1

Query: 317 PGLSLFTKAWICEYAGNLHEQLVIGLERISFL*K*FHLNDNTPYSDLMSCSKLKSFN*SR 138
           PG S      + EY  N+++     L++IS       +N N+    ++S +K    N   
Sbjct: 8   PGKSDSINTRMQEYMKNINKDSQPVLKQISSS----RINSNSNLKGILSSTKSPK-NTYS 62

Query: 137 EEQSRVSFNRTLEKPSFLLKTLRTAPSYVTSPG*N 33
               + +FN    + SF+LK   T PSY ++ G N
Sbjct: 63  GSPGKENFNNVTAELSFILKNSPTKPSYFSASGNN 97


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 393,754,103
Number of Sequences: 1657284
Number of extensions: 7046620
Number of successful extensions: 12548
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12542
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)