Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0196
(410 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC016359-1|AAH16359.3| 165|Homo sapiens 15 kDa selenoprotein pr... 45 1e-04
BC005294-1|AAH05294.3| 165|Homo sapiens 15 kDa selenoprotein pr... 45 1e-04
AL121989-1|CAC04186.1| 162|Homo sapiens dJ604K5.1 (15 kDa selen... 45 1e-04
AF288992-1|AAG31557.1| 162|Homo sapiens 15 kDa selenoprotein pr... 45 1e-04
AF288991-1|AAG31556.1| 162|Homo sapiens 15 kDa selenoprotein pr... 45 1e-04
AF267982-1|AAF78966.1| 162|Homo sapiens 15 kDa selenoprotein pr... 45 1e-04
AF051894-1|AAC15478.1| 162|Homo sapiens 15 kDa selenoprotein pr... 45 1e-04
BX538286-1|CAD98081.1| 724|Homo sapiens hypothetical protein pr... 29 7.9
AL139421-4|CAI22511.1| 720|Homo sapiens coiled-coil domain cont... 29 7.9
AL139421-3|CAI22510.1| 1044|Homo sapiens coiled-coil domain cont... 29 7.9
AL139421-1|CAI22508.1| 1454|Homo sapiens coiled-coil domain cont... 29 7.9
AK126045-1|BAC86410.1| 978|Homo sapiens galactosaminyltransfera... 29 7.9
>BC016359-1|AAH16359.3| 165|Homo sapiens 15 kDa selenoprotein
protein.
Length = 165
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 185 CKGCCHSDEITFKEKK-YARALLQAVHANFQRIHKSRLS*KVTGPAKFPNLQIKYVRGLD 361
C+GCC +E F+ KK YA A+L+ R + + + P F LQIKYVRG D
Sbjct: 70 CRGCCQ-EEAQFETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSD 128
Query: 362 P 364
P
Sbjct: 129 P 129
>BC005294-1|AAH05294.3| 165|Homo sapiens 15 kDa selenoprotein
protein.
Length = 165
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 185 CKGCCHSDEITFKEKK-YARALLQAVHANFQRIHKSRLS*KVTGPAKFPNLQIKYVRGLD 361
C+GCC +E F+ KK YA A+L+ R + + + P F LQIKYVRG D
Sbjct: 70 CRGCCQ-EEAQFETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSD 128
Query: 362 P 364
P
Sbjct: 129 P 129
>AL121989-1|CAC04186.1| 162|Homo sapiens dJ604K5.1 (15 kDa
selenoprotein) protein.
Length = 162
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 185 CKGCCHSDEITFKEKK-YARALLQAVHANFQRIHKSRLS*KVTGPAKFPNLQIKYVRGLD 361
C+GCC +E F+ KK YA A+L+ R + + + P F LQIKYVRG D
Sbjct: 67 CRGCCQ-EEAQFETKKLYAGAILEVCGXKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSD 125
Query: 362 P 364
P
Sbjct: 126 P 126
>AF288992-1|AAG31557.1| 162|Homo sapiens 15 kDa selenoprotein
protein.
Length = 162
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 185 CKGCCHSDEITFKEKK-YARALLQAVHANFQRIHKSRLS*KVTGPAKFPNLQIKYVRGLD 361
C+GCC +E F+ KK YA A+L+ R + + + P F LQIKYVRG D
Sbjct: 67 CRGCCQ-EEAQFETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSD 125
Query: 362 P 364
P
Sbjct: 126 P 126
>AF288991-1|AAG31556.1| 162|Homo sapiens 15 kDa selenoprotein
protein.
Length = 162
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 185 CKGCCHSDEITFKEKK-YARALLQAVHANFQRIHKSRLS*KVTGPAKFPNLQIKYVRGLD 361
C+GCC +E F+ KK YA A+L+ R + + + P F LQIKYVRG D
Sbjct: 67 CRGCCQ-EEAQFETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSD 125
Query: 362 P 364
P
Sbjct: 126 P 126
>AF267982-1|AAF78966.1| 162|Homo sapiens 15 kDa selenoprotein
protein.
Length = 162
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 185 CKGCCHSDEITFKEKK-YARALLQAVHANFQRIHKSRLS*KVTGPAKFPNLQIKYVRGLD 361
C+GCC +E F+ KK YA A+L+ R + + + P F LQIKYVRG D
Sbjct: 67 CRGCCQ-EEAQFETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSD 125
Query: 362 P 364
P
Sbjct: 126 P 126
>AF051894-1|AAC15478.1| 162|Homo sapiens 15 kDa selenoprotein
protein.
Length = 162
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 185 CKGCCHSDEITFKEKK-YARALLQAVHANFQRIHKSRLS*KVTGPAKFPNLQIKYVRGLD 361
C+GCC +E F+ KK YA A+L+ R + + + P F LQIKYVRG D
Sbjct: 67 CRGCCQ-EEAQFETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSD 125
Query: 362 P 364
P
Sbjct: 126 P 126
>BX538286-1|CAD98081.1| 724|Homo sapiens hypothetical protein
protein.
Length = 724
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 161 AWNNS*DHCKGCCHSDEITFKEKKYARAL----LQAVHAN 268
+++N D C GCC ++++ E + A+ +Q +HAN
Sbjct: 142 SFSNKEDRCIGCCEANKLVISELRIKLAIKEAEIQKLHAN 181
>AL139421-4|CAI22511.1| 720|Homo sapiens coiled-coil domain
containing 18 protein.
Length = 720
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 161 AWNNS*DHCKGCCHSDEITFKEKKYARAL----LQAVHAN 268
+++N D C GCC ++++ E + A+ +Q +HAN
Sbjct: 142 SFSNKEDRCIGCCEANKLVISELRIKLAIKEAEIQKLHAN 181
>AL139421-3|CAI22510.1| 1044|Homo sapiens coiled-coil domain
containing 18 protein.
Length = 1044
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 161 AWNNS*DHCKGCCHSDEITFKEKKYARAL----LQAVHAN 268
+++N D C GCC ++++ E + A+ +Q +HAN
Sbjct: 167 SFSNKEDRCIGCCEANKLVISELRIKLAIKEAEIQKLHAN 206
>AL139421-1|CAI22508.1| 1454|Homo sapiens coiled-coil domain
containing 18 protein.
Length = 1454
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 161 AWNNS*DHCKGCCHSDEITFKEKKYARAL----LQAVHAN 268
+++N D C GCC ++++ E + A+ +Q +HAN
Sbjct: 422 SFSNKEDRCIGCCEANKLVISELRIKLAIKEAEIQKLHAN 461
>AK126045-1|BAC86410.1| 978|Homo sapiens galactosaminyltransferase
9 protein.
Length = 978
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 161 AWNNS*DHCKGCCHSDEITFKEKKYARAL----LQAVHAN 268
+++N D C GCC ++++ E + A+ +Q +HAN
Sbjct: 101 SFSNKEDRCIGCCEANKLVISELRIKLAIKEAEIQKLHAN 140
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,702,866
Number of Sequences: 237096
Number of extensions: 1044196
Number of successful extensions: 1629
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1622
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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