Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0195
         (571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     27   0.15 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   1.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   5.6  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   7.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   7.4  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 14/56 (25%), Positives = 26/56 (46%)
 Frame = +1

Query: 358 DPIIKLLDKDGIVKDTVAIEKWNTDSVEEFLNTHLDKEHDDEPDFLKTNPI*CFKN 525
           +P  KL D D +    + I  W  +   +   +H+  + D++PD +  N    FK+
Sbjct: 202 NPHAKLYDYD-LSSHVITILDWTKEDGTDKFMSHIHNDGDNKPDTILVNGFGRFKH 256


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 105 REAQSSVENSATAPSYVTSTG*NETLPNT 19
           ++  +  ENS T P Y   T  N+  P+T
Sbjct: 432 QDCSTPTENSPTKPYYKLKTANNKRPPST 460


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -3

Query: 317 AGLSLFTKAWICGYAGNLHVQLLIWLERISFLLKLIHLND 198
           AGL++F   +IC  A      L +  ++   L++L  +ND
Sbjct: 325 AGLAIFILYFICDEAHYASNCLRVQFQKKLLLVELSWMND 364


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 452 ILISIKNTTMNLIS*KQTRYNALRINVLL 538
           +  +I NTT+ ++  K+ R    RIN +L
Sbjct: 64  VFSAIANTTVLVLIVKRRRKTPSRINTML 92


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 452 ILISIKNTTMNLIS*KQTRYNALRINVLL 538
           +  +I NTT+ ++  K+ R    RIN +L
Sbjct: 64  VFSAIANTTVLVLIVKRRRKTPSRINTML 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,177
Number of Sequences: 336
Number of extensions: 2562
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)