Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0195
         (571 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024211-2|AAF36064.2|  152|Caenorhabditis elegans Hypothetical ...    67   7e-12
Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.       29   3.1  
Z81526-4|CAB04267.2|  430|Caenorhabditis elegans Hypothetical pr...    27   7.2  

>AC024211-2|AAF36064.2|  152|Caenorhabditis elegans Hypothetical
           protein Y76B12C.3 protein.
          Length = 152

 Score = 67.3 bits (157), Expect = 7e-12
 Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
 Frame = +1

Query: 217 FKRKEIRSSHIRSCTCKFPAYPQIQAFVKSDRPAKFPN-LQIKYVRGLDPIIKLLDKDGI 393
           FK ++  ++ +  C C    +PQ+QAFV  D   +F   +++K+VRG+ P + L D D  
Sbjct: 69  FKHEKYPTAILEVCECNLARFPQVQAFVHKDMARQFGGKVKVKHVRGVRPQVALKDADFK 128

Query: 394 VKDTVAIEKWNTDSVEEFLNTHLD 465
            K+ +++EKW+TD++ +F N  L+
Sbjct: 129 TKEVLSVEKWDTDTLIDFFNQWLE 152



 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = +2

Query: 65  GAVAEFS--TEDCASLGFIKANLLCSSCDQLKDFSLEQLIDHCKECCHSDESASKEKKYA 238
           G V E+    E+C + GF    L C  C++L D+ LE L+  C +CC  +E   K +KY 
Sbjct: 17  GEVEEYKIDVEECKAAGFNPETLKCGLCERLSDYHLETLLTDCLQCCIKEEE-FKHEKYP 75

Query: 239 RAILEAVHANFQR 277
            AILE    N  R
Sbjct: 76  TAILEVCECNLAR 88


>Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical
           protein F58A3.2c protein.
          Length = 1158

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +1

Query: 358 DPIIK--LLDKDGIVKDTVAIEKWNTDSVEEFLNT-HLDKEHDDEPDFLKTNPI 510
           DP++K  +L KD ++      E+  ++S  EF+N    + + D+E D+  + P+
Sbjct: 217 DPLVKRVVLKKDDVIVPVHDSEESPSESRTEFINADEKENKEDEEEDYSVSQPV 270


>Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical
           protein F58A3.2e protein.
          Length = 1051

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +1

Query: 358 DPIIK--LLDKDGIVKDTVAIEKWNTDSVEEFLNT-HLDKEHDDEPDFLKTNPI 510
           DP++K  +L KD ++      E+  ++S  EF+N    + + D+E D+  + P+
Sbjct: 217 DPLVKRVVLKKDDVIVPVHDSEESPSESRTEFINADEKENKEDEEEDYSVSQPV 270


>Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical
           protein F58A3.2d protein.
          Length = 1096

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +1

Query: 358 DPIIK--LLDKDGIVKDTVAIEKWNTDSVEEFLNT-HLDKEHDDEPDFLKTNPI 510
           DP++K  +L KD ++      E+  ++S  EF+N    + + D+E D+  + P+
Sbjct: 217 DPLVKRVVLKKDDVIVPVHDSEESPSESRTEFINADEKENKEDEEEDYSVSQPV 270


>Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical
           protein F58A3.2a protein.
          Length = 1040

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +1

Query: 358 DPIIK--LLDKDGIVKDTVAIEKWNTDSVEEFLNT-HLDKEHDDEPDFLKTNPI 510
           DP++K  +L KD ++      E+  ++S  EF+N    + + D+E D+  + P+
Sbjct: 217 DPLVKRVVLKKDDVIVPVHDSEESPSESRTEFINADEKENKEDEEEDYSVSQPV 270


>U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.
          Length = 1040

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +1

Query: 358 DPIIK--LLDKDGIVKDTVAIEKWNTDSVEEFLNT-HLDKEHDDEPDFLKTNPI 510
           DP++K  +L KD ++      E+  ++S  EF+N    + + D+E D+  + P+
Sbjct: 217 DPLVKRVVLKKDDVIVPVHDSEESPSESRTEFINADEKENKEDEEEDYSVSQPV 270


>Z81526-4|CAB04267.2|  430|Caenorhabditis elegans Hypothetical
           protein F33H2.7 protein.
          Length = 430

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
 Frame = +2

Query: 65  GAVAEFSTEDCASLGFIKANLLCSSCDQLKDFSLEQLIDHCKECCHSDESASKEKKYAR- 241
           G  ++  T++C   GF+K +  CS C++L     EQ I          E+  K  ++   
Sbjct: 254 GLSSKCRTKNCT--GFVKGSGNCSVCEKLAFLPFEQSIHSTLNLLDIIENLHKTNQFTTV 311

Query: 242 ---AILEAVHANFQRI 280
              A L+ + A++Q I
Sbjct: 312 QELAYLQKLRADYQDI 327


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,672,655
Number of Sequences: 27780
Number of extensions: 235163
Number of successful extensions: 725
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)