Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0195
(571 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 26 0.30
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.40
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 1.6
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 1.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.1
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 3.7
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 21 6.5
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 21 6.5
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 6.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 6.5
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 21 6.5
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 6.5
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 25.8 bits (54), Expect = 0.30
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 346 VRGLDPIIKLLDKDGIVKDTVAIEKWNTDSVEEFL 450
+RG I+K + V D V + W+TD EEF+
Sbjct: 115 IRGNSAILKCV-VPSFVADFVKVLSWHTDQGEEFV 148
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.4 bits (53), Expect = 0.40
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +1
Query: 295 FVKSDRPAKFPNLQIKYVRGLDPIIKLLDKDGIVKDTVAIEKWNTDSVEEFLNT 456
F K + + L ++ + D + L+DK K IE W+ +V+E N+
Sbjct: 17 FTKQKKVKEDTELNLQTIFNEDKLDNLMDKQFKNKSLPVIEIWDQMTVKELANS 70
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = -3
Query: 248 IWLERISFLLKLIHL 204
+WL++I LL++IHL
Sbjct: 5 MWLQQIFILLQMIHL 19
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 131 CSSCDQLKDFSLEQLIDHCKECCHSD 208
C CD++++ Q + C+ HSD
Sbjct: 328 CLDCDEIRESLDTQFLQVCRSRRHSD 353
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 2.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 105 REAQSSVENSATAPSYVTSTG*NETLP 25
R+ + A+ P+ VT+TG TLP
Sbjct: 203 RDESKAGSTDASTPATVTTTGATTTLP 229
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 22.2 bits (45), Expect = 3.7
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -1
Query: 466 YRDEYSKILLLNQCSIFRWLRYLLQCHPYQVV*LLG 359
Y E S + + F RYL CHP +V + G
Sbjct: 119 YVSEMSSYVSVLTIVAFSMERYLAICHPLRVYTISG 154
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -2
Query: 285 LWIRWKFACTASNMARAYFFSF 220
LW +K N+ R YF +F
Sbjct: 104 LWTSYKKVFMKDNILRQYFITF 125
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -2
Query: 285 LWIRWKFACTASNMARAYFFSF 220
LW +K N+ R YF +F
Sbjct: 87 LWTSYKKVFMKDNILRQYFITF 108
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 6.5
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = +1
Query: 418 KWNTDSVEEFLNTHLDKEHDDEPDFLKTN 504
KWN D H+ EH PD + N
Sbjct: 83 KWNPDDYGGVDTLHVPSEHIWLPDIVLYN 111
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 38 F*PVLVTYDGAVAEFSTEDCASLGFIK 118
F V+ +DG V + C +LG++K
Sbjct: 164 FCAVISMHDGLVLYTTPSICTALGYLK 190
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +2
Query: 146 QLKDFSLEQLIDHCKECCHSDESASKEK 229
+L+D + +++ E C DE+ + EK
Sbjct: 508 KLEDLEMGTPLENILESCQQDETHAPEK 535
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 38 F*PVLVTYDGAVAEFSTEDCASLGFIK 118
F V+ +DG V + C +LG++K
Sbjct: 159 FCAVISMHDGLVLYTTPSICTALGYLK 185
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,621
Number of Sequences: 438
Number of extensions: 2740
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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