Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0194
         (692 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   8.4  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    21   8.4  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    21   8.4  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 143  SRKKNGPRPLEGGPGTQ 193
            S++ N P+P  GG GT+
Sbjct: 1018 SQEANKPKPATGGKGTR 1034


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 622 SNFLGSRGPKALNRNP 669
           S F G+  PK  N+NP
Sbjct: 17  SEFEGASSPKKRNKNP 32


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 282 ALQHIPLSPAGVIAKRPAPIALPNSC 359
           AL   P  P G   K  AP+ L  +C
Sbjct: 55  ALGEAPCDPVGRRLKSLAPLVLRGAC 80


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 282 ALQHIPLSPAGVIAKRPAPIALPNSC 359
           AL   P  P G   K  AP+ L  +C
Sbjct: 55  ALGEAPCDPVGRRLKSLAPLVLRGAC 80


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,961
Number of Sequences: 438
Number of extensions: 4031
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)