Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0193
         (677 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   3.8  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   5.1  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       23   6.7  
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    23   8.9  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 27  DSPRRKVLFAKIDKKTKILNFEFQVTF 107
           D+P   +LF K+D KT +   ++ V F
Sbjct: 252 DTPLTSLLFYKLDSKTLVAWEQYSVDF 278


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +3

Query: 363 RRSRQPRASGRIVKLYSGARREPIICSSDGFKADPHDCTVF 485
           R++  PRA  R + L + ++      S  G   D  DC  F
Sbjct: 291 RQAETPRADDRALNLDTKSKPSTSSSSGTGCDRDDGDCITF 331


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 518 TIFRFQCGPGTIYD 559
           T + F C PGT++D
Sbjct: 495 TYYEFTCPPGTLFD 508


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +2

Query: 515 YTIFRFQCGPGTIYDIYSGGCTTHVVQNGPEVWGP*CALGRKK 643
           Y +F      G  ++  + G  T+ V + PE WG  C  GR++
Sbjct: 10  YALFVLHAARGDEWNYPTPG--TNGVMSEPERWGGQCDNGRRQ 50


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,739
Number of Sequences: 2352
Number of extensions: 15265
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)