Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0192
(600 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 99 7e-20
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 90 4e-17
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 87 3e-16
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 82 8e-15
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 80 3e-14
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 77 3e-13
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 64 2e-09
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 64 2e-09
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 64 2e-09
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 62 1e-08
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 57 3e-07
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 57 4e-07
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 52 1e-05
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 51 2e-05
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 41 0.019
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 41 0.026
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 41 0.026
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 40 0.045
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 39 0.10
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 38 0.14
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 38 0.18
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 38 0.24
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 37 0.32
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 37 0.32
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 37 0.42
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 37 0.42
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ... 36 0.55
UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7... 36 0.55
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 36 0.73
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 36 0.73
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 36 0.97
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 35 1.3
UniRef50_A3FQM9 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 35 1.7
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 35 1.7
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 34 2.2
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 34 2.2
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 34 2.9
UniRef50_A2U8Z5 Cluster: Peptidase C26; n=2; Bacillaceae|Rep: Pe... 33 3.9
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 33 3.9
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 33 3.9
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 33 5.1
UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;... 32 9.0
UniRef50_A7DIW1 Cluster: Sodium/hydrogen exchanger; n=3; Alphapr... 32 9.0
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 99.1 bits (236), Expect = 7e-20
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = -1
Query: 255 QENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 109
+ENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK KKERPRS
Sbjct: 95 EENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/48 (85%), Positives = 44/48 (91%)
Frame = -2
Query: 392 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIKK 249
G LEKVGVEAKQPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN I++
Sbjct: 49 GIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEE 96
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 89.8 bits (213), Expect = 4e-17
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = -1
Query: 246 DEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 109
DEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 87.0 bits (206), Expect = 3e-16
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = -1
Query: 252 ENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 109
ENDEVL+AGFGRKG A GDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 98 ENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
Score = 85.0 bits (201), Expect = 1e-15
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = -2
Query: 392 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 255
G LEK+G+E+KQPNSAIRKCVRVQLIKNGKKVTAFVP DGCLN +
Sbjct: 51 GIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFV 96
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 82.2 bits (194), Expect = 8e-15
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = -2
Query: 392 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIKK 249
G LEK+G+EAKQPNSAI KC RVQL+KNGKK+ AFVP DGCLN IK+
Sbjct: 119 GIVLEKIGIEAKQPNSAICKCARVQLVKNGKKIAAFVPNDGCLNFIKE 166
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 80.2 bits (189), Expect = 3e-14
Identities = 39/59 (66%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Frame = -2
Query: 422 YDSL*GE-LGTGPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIKK 249
YD L G + G LEKVGVEA++PN+A+RKCVRVQL+KNGK VTAFVP DG LN+I +
Sbjct: 41 YDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINE 99
Score = 54.8 bits (126), Expect = 1e-06
Identities = 25/47 (53%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Frame = -1
Query: 252 ENDEVLVAGFGR-KGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 115
E+DEV++ G +G ++GDIPGVRFKV+KV VSL A+++ KK++P
Sbjct: 99 EHDEVVIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWAIWRGKKQKP 145
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 77.0 bits (181), Expect = 3e-13
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = -2
Query: 392 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 255
G LEKVGVEAKQPNSAIRKC+R+QLIKNG+++TAF P DG +N I
Sbjct: 47 GIVLEKVGVEAKQPNSAIRKCIRIQLIKNGRQITAFCPGDGAINFI 92
Score = 49.2 bits (112), Expect = 7e-05
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = -1
Query: 252 ENDEVLVAGFG-RKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 115
E+DEV + G G R G + GDIPGVRF+V KV +VSL + K+++P
Sbjct: 94 EHDEVTIEGIGGRMGGSYGDIPGVRFRVFKVNDVSLEEMVAGKRDKP 140
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 64.1 bits (149), Expect = 2e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 507 PFASWRNSEEARTDRPSQQLRSLNGEWQ 590
PFASWRNSEEARTDRPSQQLRSLNGEW+
Sbjct: 51 PFASWRNSEEARTDRPSQQLRSLNGEWR 78
Score = 57.2 bits (132), Expect = 3e-07
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +1
Query: 433 LAVVLQRRDWENPGVTQLNRLAAHP 507
LAVVLQRRDWENPGVTQLNRLAAHP
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHP 50
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 64.1 bits (149), Expect = 2e-09
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = +2
Query: 101 YTYDLGRSFFSL*RARRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFS 253
Y YDLG SFFS +A ++T T TTL TPG+SP A PL P PA TSSFS
Sbjct: 3 YIYDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFS 53
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +1
Query: 262 FRQPSRGTNAVTFFPFLMSCTRTHLRMAELGCLASTPTFSRGGPV 396
F+QPS GT AVTF PFL++ T TH +AE GCL S P FS+ P+
Sbjct: 57 FKQPSFGTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPL 101
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 64.1 bits (149), Expect = 2e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 507 PFASWRNSEEARTDRPSQQLRSLNGEWQ 590
PFASWRNSEEARTDRPSQQLRSLNGEW+
Sbjct: 33 PFASWRNSEEARTDRPSQQLRSLNGEWR 60
Score = 57.2 bits (132), Expect = 3e-07
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +1
Query: 433 LAVVLQRRDWENPGVTQLNRLAAHP 507
LAVVLQRRDWENPGVTQLNRLAAHP
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHP 32
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 507 PFASWRNSEEARTDRPSQQLRSLNGEWQ 590
PFASWRNSEEARTDRPSQQLR LNGEW+
Sbjct: 93 PFASWRNSEEARTDRPSQQLRXLNGEWR 120
Score = 57.2 bits (132), Expect = 3e-07
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +1
Query: 433 LAVVLQRRDWENPGVTQLNRLAAHP 507
LAVVLQRRDWENPGVTQLNRLAAHP
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHP 92
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 61.7 bits (143), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 431 HWPSFYNVVTGKTLALPNLIALQHIP 508
HWPSFYNVVTGKTLALPNLIALQHIP
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIP 30
Score = 35.5 bits (78), Expect = 0.97
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +3
Query: 528 SEEARTDRPSQQLRSLNGEWQI 593
SEEARTDRPSQQLRSL +W++
Sbjct: 38 SEEARTDRPSQQLRSL--KWRM 57
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 57.2 bits (132), Expect = 3e-07
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +1
Query: 433 LAVVLQRRDWENPGVTQLNRLAAHP 507
LAVVLQRRDWENPGVTQLNRLAAHP
Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHP 46
Score = 52.4 bits (120), Expect = 8e-06
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +3
Query: 507 PFASWRNSEEARTDRPSQQLRSL 575
PFASWRNSEEARTDRPSQQLRSL
Sbjct: 47 PFASWRNSEEARTDRPSQQLRSL 69
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 56.8 bits (131), Expect = 4e-07
Identities = 23/26 (88%), Positives = 26/26 (100%)
Frame = +3
Query: 519 WRNSEEARTDRPSQQLRSLNGEWQIV 596
WRNSEEARTDRPSQQLRSLNGEW+++
Sbjct: 47 WRNSEEARTDRPSQQLRSLNGEWRLM 72
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/36 (72%), Positives = 27/36 (75%)
Frame = -2
Query: 596 YNLPFAIQAAQLLGRAIGAGLFAITPAGERGCAARR 489
+ PFAIQAAQLLGRAIGAGLFAITP E G R
Sbjct: 8 HQAPFAIQAAQLLGRAIGAGLFAITPEFELGTPESR 43
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = -1
Query: 246 DEVLVAGFGRKGHAVGDIPGVRFKVVK 166
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = -1
Query: 252 ENDEVLVAGFGR-KGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 115
E+DEV++ G +G A GD+PGVRFKV KV VSL A+ KK++P
Sbjct: 613 EHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNGVSLKAILLGKKQKP 659
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = -2
Query: 332 CVRVQLIKNGKKVTAFVPRDGCLNHIKK 249
CVRVQL KNGK VTAFVP DG LN I +
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINE 613
Score = 41.5 bits (93), Expect = 0.015
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = -2
Query: 422 YDSL*GE-LGTGPPLEKVGVEAKQPNSAIRKCVRVQLIKN 306
YD L G + G LEKVGVEA++PN+A+RKCV + N
Sbjct: 41 YDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVTPDTLIN 80
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 41.1 bits (92), Expect = 0.019
Identities = 16/40 (40%), Positives = 32/40 (80%)
Frame = +1
Query: 136 VESEERHVGYFYHLKTNSGNVTDGVTFTTESRH*YFVVFL 255
++S++R++GYF HLK +S ++T +TF+T+S + + ++FL
Sbjct: 9 LQSQQRNIGYFNHLKEDSRDITYSMTFSTKSSN-WIIIFL 47
Score = 35.9 bits (79), Expect = 0.73
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +3
Query: 249 FLDVV*ATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLE 383
FL+ V A + G E L VLNEL+ DA DGR+ L F +
Sbjct: 46 FLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQ 90
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 40.7 bits (91), Expect = 0.026
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 433 LAVVLQRRDWENPGVTQLNRLAAHP 507
L +L RRDWENP +TQ +RL AHP
Sbjct: 15 LPQILSRRDWENPQITQYHRLEAHP 39
Score = 39.9 bits (89), Expect = 0.045
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 507 PFASWRNSEEARTDRPSQQLRSLNGEW 587
PF SWR+ E A+ DRPS Q ++LNG W
Sbjct: 40 PFHSWRDVESAQKDRPSPQQQTLNGLW 66
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 40.7 bits (91), Expect = 0.026
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = -2
Query: 368 VEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 270
++ K+PNSA+RKC RV+L NGK ++A +P +G
Sbjct: 99 LKPKKPNSALRKCARVRL-SNGKVISALIPGEG 130
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 39.9 bits (89), Expect = 0.045
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = -2
Query: 359 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 270
K+PNSA RKC RV+L NGK+V F+P +G
Sbjct: 82 KKPNSANRKCARVRL-SNGKEVICFIPGEG 110
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 38.7 bits (86), Expect = 0.10
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = -2
Query: 392 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 270
G L+ + + K+PNSA RKCV V+L NGK++TA++P G
Sbjct: 93 GVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIPGIG 132
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 38.3 bits (85), Expect = 0.14
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = -2
Query: 368 VEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 270
V K+PNSA+RK RV+L NG +VTA++P +G
Sbjct: 40 VTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG 71
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 37.9 bits (84), Expect = 0.18
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = -2
Query: 392 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 270
G L+ V + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 31 GVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG 70
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 37.5 bits (83), Expect = 0.24
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 433 LAVVLQRRDWENPGVTQLNRLAAH 504
LA +L R DW+NP +T +NRL +H
Sbjct: 18 LATILARNDWQNPAITSVNRLPSH 41
Score = 36.3 bits (80), Expect = 0.55
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 498 STSPFASWRNSEEARTDRPSQQLRSLNGEWQ 590
S +P WR+++ AR PS + SL+GEWQ
Sbjct: 40 SHTPLHGWRDADRARRGEPSDAVLSLDGEWQ 70
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 37.1 bits (82), Expect = 0.32
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 436 AVVLQRRDWENPGVTQLNRLAAHPLSPAGVIAKRPAP 546
A L+RR+ +NPG QLN L A PL P G K+ P
Sbjct: 57 AAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKKAPP 93
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.1 bits (82), Expect = 0.32
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 380 RGGARYPIRPIVSRIT 427
RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 36.7 bits (81), Expect = 0.42
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = -2
Query: 392 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 270
G L+ + + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 78 GVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG 117
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 36.7 bits (81), Expect = 0.42
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = -2
Query: 368 VEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 270
V+ K+PNSA+RK RV+L G+ VTA++P G
Sbjct: 61 VKPKKPNSAVRKVARVRL-STGRSVTAYIPGIG 92
>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
uncultured bacterium|Rep: Non-ribosomal peptide
synthetase - uncultured bacterium
Length = 338
Score = 36.3 bits (80), Expect = 0.55
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = -2
Query: 482 WVTPGFSQSRRCKTTASEL*YDSL*GELGTGPPLEKVGVE 363
W GF C YDSL GELGTGPPLE G++
Sbjct: 260 WSKTGFRPF--CLEAGRRAYYDSLYGELGTGPPLEVDGID 297
>UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7;
Trichocomaceae|Rep: C6 finger domain protein, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 1148
Score = 36.3 bits (80), Expect = 0.55
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 436 PVNCNTTHYRANWVPGPPSRKLV*KLSSPTLPSANASVYSS 314
PV N +R W+PGPP+R ++ S + A S Y+S
Sbjct: 619 PVTDNPPDFRKEWIPGPPTRSVLSPAGSDMIIPAQGSFYAS 659
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 35.9 bits (79), Expect = 0.73
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +3
Query: 249 FLDVV*ATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLE 383
FL+ V A + G E L VLNEL+ DA DGR+ L F +
Sbjct: 15 FLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQ 59
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 35.9 bits (79), Expect = 0.73
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = -2
Query: 359 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 270
++PNSA+RK RV+L NG+ TA++P +G
Sbjct: 94 RKPNSAVRKVARVKL-SNGQMTTAYIPGEG 122
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 35.5 bits (78), Expect = 0.97
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 442 VLQRRDWENPGVTQLNRLAAHPL 510
VL R DW N +T LNRL AHP+
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPV 39
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 35.1 bits (77), Expect = 1.3
Identities = 14/30 (46%), Positives = 24/30 (80%)
Frame = -2
Query: 359 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 270
K+PNSA+RK +++L KN K++ A++P +G
Sbjct: 41 KKPNSALRKIAKIKL-KNKKEILAYIPGEG 69
>UniRef50_A3FQM9 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 226
Score = 34.7 bits (76), Expect = 1.7
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 3 FFCCTQYLLCTRILHFMNL*TTRFPTAGHLSQCTPMILVAPFSLCRERGETRWLL 167
+F C +YL + N T F +G L++C I+ P +CRER + + L
Sbjct: 76 YFSCYEYLKRLKFKFIENRDLTNF-ISGFLAECVSCIIWVPVDICRERSQLDYYL 129
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 34.7 bits (76), Expect = 1.7
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -2
Query: 377 KVGV-EAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 270
+VG+ + K+PNS RK RV+L GK +TA++P +G
Sbjct: 49 RVGITKPKKPNSGERKTARVRL-STGKVITAYIPGEG 84
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 34.7 bits (76), Expect = 1.7
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = -2
Query: 392 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 270
G L + ++ K+PNSA RK RV+L NG V+A++P +G
Sbjct: 60 GVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG 99
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 34.7 bits (76), Expect = 1.7
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -2
Query: 359 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 270
K+PNSA RKC RV+L G++ F+P +G
Sbjct: 71 KKPNSANRKCCRVRL-STGREAVCFIPGEG 99
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 34.3 bits (75), Expect = 2.2
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = -2
Query: 392 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 270
G L+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 74 GVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 113
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 34.3 bits (75), Expect = 2.2
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = -2
Query: 392 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 270
G L+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 60 GVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 99
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 33.9 bits (74), Expect = 2.9
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 442 VLQRRDWENPGVTQLNRLAAHPLSPAGVIAKR 537
VL+R+DWENP V+ NRL H +P ++ K+
Sbjct: 9 VLERKDWENPVVSNWNRLPMH--TPMDLLEKQ 38
>UniRef50_A2U8Z5 Cluster: Peptidase C26; n=2; Bacillaceae|Rep:
Peptidase C26 - Bacillus coagulans 36D1
Length = 234
Score = 33.5 bits (73), Expect = 3.9
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Frame = +1
Query: 58 YKQRASRQQVTYHNVHL*SWSLLFLFVESEERHVGYFYHLKTN--------SGNVTDGVT 213
+KQRA+R ++ H VH+ SLL + SE V F+H S DG+
Sbjct: 133 HKQRAARSHLS-HTVHVLPGSLLEKWAGSETMKVNSFHHQAVRTVKAPLMVSARAPDGII 191
Query: 214 FTTESRH*YFVVFLMW 261
E+R+ F++ + W
Sbjct: 192 EAVENRNARFMIGVQW 207
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 33.5 bits (73), Expect = 3.9
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = -2
Query: 359 KQPNSAIRKCVRVQLIKNGKKVTAFVP 279
K+PNSA RKC ++L NGK ++A++P
Sbjct: 48 KKPNSAQRKCALLKL-SNGKTISAYIP 73
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 33.5 bits (73), Expect = 3.9
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = -2
Query: 368 VEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 270
V K+PNSA+RK RV+L G +VTA++P G
Sbjct: 40 VTPKKPNSALRKVARVRL-TTGFEVTAYIPGVG 71
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 33.1 bits (72), Expect = 5.1
Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +1
Query: 442 VLQRRDWENPGVTQLNRLAAH-PLS 513
++ RRDWENP Q+N++ AH PL+
Sbjct: 7 IINRRDWENPITVQVNQVKAHSPLN 31
>UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 195
Score = 32.3 bits (70), Expect = 9.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 433 LAVVLQRRDWENP 471
LAVVLQRRDWENP
Sbjct: 179 LAVVLQRRDWENP 191
>UniRef50_A7DIW1 Cluster: Sodium/hydrogen exchanger; n=3;
Alphaproteobacteria|Rep: Sodium/hydrogen exchanger -
Methylobacterium extorquens PA1
Length = 694
Score = 32.3 bits (70), Expect = 9.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 306 RKESDRIRPP*RLPKPHQENDEVLVAGFGRKGHAVGDI 193
R ++ P P P E + V++AG+GR G VG++
Sbjct: 476 RASKQQVGPAQAEPVPEPEQNRVIIAGYGRVGRLVGEM 513
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,557,305
Number of Sequences: 1657284
Number of extensions: 14515280
Number of successful extensions: 35285
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 33941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35278
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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