Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0191
         (735 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1318 - 26111031-26111276,26112139-26112427,26112936-261130...    29   2.9  
10_01_0266 + 2816391-2818898,2818934-2819162,2819369-2819444,281...    29   5.1  
03_01_0355 - 2789680-2791263                                           29   5.1  
05_01_0609 + 5443780-5443875,5444540-5445136,5448792-5448881,544...    28   8.8  
04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019           28   8.8  

>08_02_1318 -
           26111031-26111276,26112139-26112427,26112936-26113036,
           26113628-26113878,26114842-26114865,26115793-26116129
          Length = 415

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = -2

Query: 524 NFRMECCFN-DWFHRMEKCVNFRGEDFEKQ*IHF*IVMLCHFVNSRNFQCRLVHSLGWKR 348
           +++ E   N DW    EKCV  R    E+      +  L H    RN  C +V S G +R
Sbjct: 195 SYKAELSLNRDWSKWAEKCVGRRFTGLERMDCCCCVAGLGHIPGMRNIACIVVSSSGDRR 254


>10_01_0266 +
           2816391-2818898,2818934-2819162,2819369-2819444,
           2819776-2819830,2822042-2822110,2823077-2823321,
           2824029-2824065
          Length = 1072

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 215 TIRTIGSEKFSHGKSAYFYLLR-IDNWPQRLKDCIAANGDHFE*AFYTLNCF 63
           TIR   S KF+H K  Y+ ++  ++++P+ L D             Y+L CF
Sbjct: 825 TIRNSRSFKFTHKKFGYWMIIEMLNSYPRELLDNFQVMDSSAAGVTYSLLCF 876


>03_01_0355 - 2789680-2791263
          Length = 527

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 122 PLNVEASYQYAEDRSTHSFHGKIFHFQSYGLL*GLQVIMAFRA 250
           PL+     +YA  R+  +F   +F  Q +G+L G  V +A  A
Sbjct: 146 PLSATIMSEYANKRTRGAFIAAVFAMQGFGILFGAIVALAVSA 188


>05_01_0609 +
           5443780-5443875,5444540-5445136,5448792-5448881,
           5449615-5450121
          Length = 429

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 315 PSSSPDLNPLDYYLWSVLESRLALNAMITWS 223
           P++S  L+P+   L    E+RL  N ++TWS
Sbjct: 188 PATSSGLHPIYLLLRGSKETRLGANNLLTWS 218


>04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019
          Length = 508

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
 Frame = +2

Query: 122 PLNVEASYQYAEDRSTHSFHGKIFHFQSYGLL----*GLQVIMAFRASLLSKTDH 274
           PL+     +YA  R+  +F   +F  Q +G L     G+ V  AF+ S  SK D+
Sbjct: 141 PLSATIMSEYANKRTRGAFIAAVFAMQGFGNLAAGIIGMIVSAAFKHSSASKIDY 195


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,042,282
Number of Sequences: 37544
Number of extensions: 409481
Number of successful extensions: 841
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)