Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0191
         (735 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_49613| Best HMM Match : Transposase_5 (HMM E-Value=0.033)           38   0.008
SB_21757| Best HMM Match : Hormone_3 (HMM E-Value=3.9)                 38   0.011
SB_56472| Best HMM Match : Transposase_5 (HMM E-Value=1.2)             37   0.015
SB_42850| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.015
SB_30859| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.015
SB_16626| Best HMM Match : DUF1257 (HMM E-Value=3.6)                   37   0.015
SB_1045| Best HMM Match : Hormone_3 (HMM E-Value=3.9)                  37   0.019
SB_54333| Best HMM Match : Glyco_hydro_39 (HMM E-Value=0)              29   3.9  
SB_25957| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.8  
SB_18521| Best HMM Match : ig (HMM E-Value=7.5e-11)                    28   9.0  

>SB_49613| Best HMM Match : Transposase_5 (HMM E-Value=0.033)
          Length = 999

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -1

Query: 321 DWPSSSPDLNPLDYYLWSVLESRLALNAMITWSPYNNPYDWK*KIFPWKECV 166
           +W   SPDLNP D+YLW  L+  +      T          K +  P +EC+
Sbjct: 693 EWAPHSPDLNPPDFYLWGFLKDNVYQGNPQTIEELKTAITAKIRAIPKEECI 744


>SB_21757| Best HMM Match : Hormone_3 (HMM E-Value=3.9)
          Length = 254

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -1

Query: 321 DWPSSSPDLNPLDYYLWSVLESRLALNAMITWSPYNNPYDWK*KIFPWKECV 166
           +W   SPDLNP D+YLW  L+  +      T          K    P +EC+
Sbjct: 84  EWAQHSPDLNPPDFYLWGFLKDNVYQGNPQTIEKLKTAITAKINAIPKEECI 135


>SB_56472| Best HMM Match : Transposase_5 (HMM E-Value=1.2)
          Length = 615

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -1

Query: 321 DWPSSSPDLNPLDYYLWSVLESRLALNAMITWSPYNNPYDWK*KIFPWKECV 166
           +W   SPDLNP D+YLW  L+  +      T          K    P +EC+
Sbjct: 308 EWAPHSPDLNPPDFYLWGFLKDNVYQGNPQTIEKLKTAITAKINAIPKEECI 359


>SB_42850| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 474

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -1

Query: 321 DWPSSSPDLNPLDYYLWSVLESRLALNAMITWSPYNNPYDWK*KIFPWKECV 166
           +W   SPDLNP D+YLW  L+  +      T          K    P +EC+
Sbjct: 84  EWAPHSPDLNPPDFYLWGFLKDNVYQGNPQTIEKLKTAITAKINAIPKEECI 135


>SB_30859| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 163

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -1

Query: 321 DWPSSSPDLNPLDYYLWSVLESRLALNAMITWSPYNNPYDWK*KIFPWKECV 166
           +W   SPDLNP D+YLW  L+  +      T          K    P +EC+
Sbjct: 84  EWAPHSPDLNPPDFYLWGFLKDNVYQGNPQTIEKLKTAITAKINAIPKEECI 135


>SB_16626| Best HMM Match : DUF1257 (HMM E-Value=3.6)
          Length = 267

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -1

Query: 321 DWPSSSPDLNPLDYYLWSVLESRLALNAMITWSPYNNPYDWK*KIFPWKECV 166
           +W   SPDLNP D+YLW  L+  +      T          K    P +EC+
Sbjct: 32  EWAPHSPDLNPPDFYLWGFLKDNVYQGNPQTIEKLKTAITAKINAIPKEECI 83


>SB_1045| Best HMM Match : Hormone_3 (HMM E-Value=3.9)
          Length = 153

 Score = 36.7 bits (81), Expect = 0.019
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -1

Query: 321 DWPSSSPDLNPLDYYLWSVLESRLALNAMITWSPYNNPYDWK*KIFPWKECV 166
           +W   SPDLNP D+YLW  L+  +      T          K    P +EC+
Sbjct: 84  EWVPHSPDLNPPDFYLWGFLKDNVYQGNPQTIEKLKTAITAKINAIPKEECI 135


>SB_54333| Best HMM Match : Glyco_hydro_39 (HMM E-Value=0)
          Length = 1325

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 578 RFSSPEEAVDAYKTAIYPNFRMECCFNDWFH 486
           R S+P  A D+Y T IY   R+   F+ + H
Sbjct: 726 RVSTPRHAYDSYSTRIYTTTRVRQLFHAYLH 756


>SB_25957| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 355

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -1

Query: 351 TNVSDFIRAEDWPSSSPDLNPLDYYLWS-VLESRLALNAMIT 229
           +++ DF+R+ D   SSPDL  L +  WS V +S   +N + T
Sbjct: 44  SDLGDFLRSPDLGISSPDLENLVWKEWSDVNKSMTPMNLVPT 85


>SB_18521| Best HMM Match : ig (HMM E-Value=7.5e-11)
          Length = 1033

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +1

Query: 436 YCFSKSSPRKLTHFSIR 486
           Y F K SPR L+HF IR
Sbjct: 817 YAFQKPSPRPLSHFRIR 833


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,529,873
Number of Sequences: 59808
Number of extensions: 495141
Number of successful extensions: 1146
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)