Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0191
         (735 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U33463-1|AAC47095.1|  345|Drosophila melanogaster transposase pr...    31   1.6  
AF132535-1|AAD31443.1|  710|Drosophila melanogaster ldlCp-relate...    29   8.7  

>U33463-1|AAC47095.1|  345|Drosophila melanogaster transposase
           protein.
          Length = 345

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -1

Query: 372 STQSWLETNVSDFIRAEDWPSSSPDLNPLDYYLWSVLESRLA 247
           + ++WL  N    I   D P  SPDLNP++  LW+ L+ ++A
Sbjct: 257 NVRNWLLYNCGKVI---DTPPQSPDLNPIE-NLWAYLKKKVA 294


>AF132535-1|AAD31443.1|  710|Drosophila melanogaster ldlCp-related
           protein protein.
          Length = 710

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 13/51 (25%), Positives = 28/51 (54%)
 Frame = -1

Query: 363 SWLETNVSDFIRAEDWPSSSPDLNPLDYYLWSVLESRLALNAMITWSPYNN 211
           +++  +++DF+R   +    P  N +    WS +E+RL L+    ++P N+
Sbjct: 282 NFISLHMTDFVRLTLYSDKFPGFNFVVNSYWSDVETRLELHMEFIFAPGNS 332


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,688,683
Number of Sequences: 53049
Number of extensions: 702265
Number of successful extensions: 1502
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1502
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)