Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0190
(701 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 5.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 5.6
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 5.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 5.6
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 5.6
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 5.6
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 5.6
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 22 5.6
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 22 5.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 5.6
DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc gr... 21 7.4
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 9.7
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 9.7
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 9.7
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 629 GTAAPRAASTTWWRPASTTACSGPSD 552
G A+P+ ST P ST S PS+
Sbjct: 109 GVASPQDLSTNGAPPRSTPPLSTPSN 134
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 629 GTAAPRAASTTWWRPASTTACSGPSD 552
G A+P+ ST P ST S PS+
Sbjct: 109 GVASPQDLSTNGAPPRSTPPLSTPSN 134
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 629 GTAAPRAASTTWWRPASTTACSGPSD 552
G A+P+ ST P ST S PS+
Sbjct: 109 GVASPQDLSTNGAPPRSTPPLSTPSN 134
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 629 GTAAPRAASTTWWRPASTTACSGPSD 552
G A+P+ ST P ST S PS+
Sbjct: 109 GVASPQDLSTNGAPPRSTPPLSTPSN 134
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 629 GTAAPRAASTTWWRPASTTACSGPSD 552
G A+P+ ST P ST S PS+
Sbjct: 109 GVASPQDLSTNGAPPRSTPPLSTPSN 134
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 629 GTAAPRAASTTWWRPASTTACSGPSD 552
G A+P+ ST P ST S PS+
Sbjct: 65 GVASPQDLSTNGAPPRSTPPLSTPSN 90
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 629 GTAAPRAASTTWWRPASTTACSGPSD 552
G A+P+ ST P ST S PS+
Sbjct: 109 GVASPQDLSTNGAPPRSTPPLSTPSN 134
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 629 GTAAPRAASTTWWRPASTTACSGPSD 552
G A+P+ ST P ST S PS+
Sbjct: 109 GVASPQDLSTNGAPPRSTPPLSTPSN 134
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 21.8 bits (44), Expect = 5.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 601 LPGGGRRALPPARDQATGPS 542
L GGGRR PAR + P+
Sbjct: 324 LAGGGRRGPGPARSRRHLPA 343
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 629 GTAAPRAASTTWWRPASTTACSGPSD 552
G A+P+ ST P ST S PS+
Sbjct: 109 GVASPQDLSTNGAPPRSTPPLSTPSN 134
>DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc
growth factor 4 protein.
Length = 431
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 680 QFPGARVEAACGGNPGVG 627
+FPG RV + GG +G
Sbjct: 90 RFPGLRVLLSVGGGEDIG 107
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/34 (23%), Positives = 14/34 (41%)
Frame = +1
Query: 502 WSRSVVIDEIGESPMVPSLGPEQAVVLAGRHQVV 603
W R V + P + P++ RHQ++
Sbjct: 213 WMRKVHVAGASNGTFAPGMEPKRQRTAYTRHQIL 246
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/34 (23%), Positives = 14/34 (41%)
Frame = +1
Query: 502 WSRSVVIDEIGESPMVPSLGPEQAVVLAGRHQVV 603
W R V + P + P++ RHQ++
Sbjct: 213 WMRKVHVAGASNGTFAPGMEPKRQRTAYTRHQIL 246
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/34 (23%), Positives = 14/34 (41%)
Frame = +1
Query: 502 WSRSVVIDEIGESPMVPSLGPEQAVVLAGRHQVV 603
W R V + P + P++ RHQ++
Sbjct: 213 WMRKVHVAGASNGTFAPGMEPKRQRTAYTRHQIL 246
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,996
Number of Sequences: 336
Number of extensions: 3515
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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