Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0190
         (701 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.13 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   2.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   6.5  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   8.6  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   8.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   8.6  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   8.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = -1

Query: 638 PGVGTAAPRAASTTWWRPASTTACSGPSDGTIGLSPISSITTERDHH 498
           P   T+ P   +TT     +TTA +  +  T     I   T +R HH
Sbjct: 97  PASSTSLPATITTTTTTTTTTTATAAATATTTATGLIKQETLQRHHH 143


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 635 GVGTAAPRAASTTWWRPA 582
           G+  AAP  AS T W PA
Sbjct: 506 GIRLAAPFNASPTTWSPA 523


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 628 PTPGLPPHAASTRAPGNCPGVAP 696
           P  G PP+ +    PG  PG  P
Sbjct: 34  PQRGSPPNPSQGPPPGGPPGAPP 56


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -3

Query: 498 PRVEVNSSLLRADRPIHRLVSPQNKL*TASVAHDQFSLT 382
           PR  + SSLLR  R I R         +  ++ D   LT
Sbjct: 377 PRRSIYSSLLRYPRSIFRQTDDHQNSPSIFISDDNQKLT 415


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 636 GCRYRGAARCKHYLV 592
           GC  R   RC HY V
Sbjct: 132 GCGERTEGRCLHYTV 146


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 636 GCRYRGAARCKHYLV 592
           GC  R   RC HY V
Sbjct: 137 GCGERTEGRCLHYTV 151


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 69  CRIWLLPIIYDCTKQLFSL 13
           C IWL   ++ CT  + +L
Sbjct: 138 CSIWLAVDVWMCTASILNL 156


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 636 GCRYRGAARCKHYLV 592
           GC  R   RC HY V
Sbjct: 137 GCGERTEGRCLHYTV 151


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,097
Number of Sequences: 438
Number of extensions: 4257
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)