Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0189
(591 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 160 9e-40
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 159 1e-39
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 159 1e-39
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 152 2e-37
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 93 2e-19
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 93 2e-19
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 91 6e-19
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 89 2e-18
03_01_0034 + 318432-318825,318902-319851 89 2e-18
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 89 2e-18
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 87 7e-18
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 76 2e-14
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 59 2e-09
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.91
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 1.2
08_02_0647 - 19687142-19687145,19687244-19689352,19689764-19690617 29 2.1
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 2.1
10_03_0016 - 7099862-7099967,7100059-7100357,7101862-7102171,710... 29 2.8
08_01_0312 + 2764744-2767390,2767632-2767990 29 2.8
12_02_0399 - 18600444-18600591,18600626-18601656 28 4.8
07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 28 4.8
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 28 4.8
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 28 4.8
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336... 28 6.4
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 27 8.5
07_03_1027 - 23371826-23372006,23372110-23372171,23372595-233743... 27 8.5
06_03_0735 - 23987349-23989196 27 8.5
04_04_1181 + 31526672-31527099,31527580-31527677,31527923-31528089 27 8.5
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 160 bits (388), Expect = 9e-40
Identities = 81/125 (64%), Positives = 88/125 (70%)
Frame = +3
Query: 210 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 389
F F + + RAVFVDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 390 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPVDYGKKSKLE 569
TIGKEIVDL LDRIRKLAD CTGLQGFL+F+ VDYGKKSKL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 570 FRHLP 584
F P
Sbjct: 169 FTVYP 173
Score = 140 bits (338), Expect = 1e-33
Identities = 56/63 (88%), Positives = 62/63 (98%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 247 HVP 255
HVP
Sbjct: 61 HVP 63
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 159 bits (387), Expect = 1e-39
Identities = 78/125 (62%), Positives = 89/125 (71%)
Frame = +3
Query: 210 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 389
F F + + RA+FVDLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 390 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPVDYGKKSKLE 569
T+GKEIVDL LDR+RKLAD CTGLQGFL+F+ VDYGKKSKL
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 570 FRHLP 584
F P
Sbjct: 169 FTIYP 173
Score = 122 bits (294), Expect = 2e-28
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 247 HVP 255
HVP
Sbjct: 61 HVP 63
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 159 bits (387), Expect = 1e-39
Identities = 81/125 (64%), Positives = 87/125 (69%)
Frame = +3
Query: 210 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 389
F F + + RAVFVDLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHY 108
Query: 390 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPVDYGKKSKLE 569
TIGKEIVDL LDRIRKLAD CTGLQGFL+F+ VDYGKKSKL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 570 FRHLP 584
F P
Sbjct: 169 FTVYP 173
Score = 136 bits (330), Expect = 9e-33
Identities = 54/63 (85%), Positives = 62/63 (98%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 247 HVP 255
HVP
Sbjct: 61 HVP 63
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 152 bits (368), Expect = 2e-37
Identities = 75/128 (58%), Positives = 88/128 (68%)
Frame = +3
Query: 201 RRFFQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 380
R F F S + RA+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KEDAANN+AR
Sbjct: 106 RDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFAR 165
Query: 381 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPVDYGKKS 560
GHYT+G+E+VDL LDR+RKLAD CTGLQGFL+F+ VDYG+KS
Sbjct: 166 GHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKS 225
Query: 561 KLEFRHLP 584
KL F P
Sbjct: 226 KLGFTIYP 233
Score = 81.4 bits (192), Expect = 5e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 183
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +1
Query: 178 TDKTIGGGDDSFNTFFSETGAGKHVP 255
+D T G D+FNTFFSET +GKHVP
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVP 123
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/76 (52%), Positives = 53/76 (69%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 434
RAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 242 RAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 301
Query: 435 KLADQCTGLQGFLIFH 482
K A+ C LQGF + H
Sbjct: 302 KEAENCDCLQGFQVCH 317
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = +1
Query: 49 KKTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 228
KK + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDL--QLERVNVYYN 232
Query: 229 ETGAGKHVP 255
E G+ VP
Sbjct: 233 EASCGRFVP 241
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/76 (52%), Positives = 53/76 (69%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 434
RAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 435 KLADQCTGLQGFLIFH 482
K A+ C LQGF + H
Sbjct: 122 KEAENCDCLQGFQVCH 137
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 237
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGTSDLQLERVNVYYNEAS 55
Query: 238 AGKHVP 255
G+ VP
Sbjct: 56 CGRFVP 61
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 91.1 bits (216), Expect = 6e-19
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 434
RAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 435 KLADQCTGLQGFLIFH 482
K A+ C LQGF + H
Sbjct: 122 KEAENCDCLQGFQVCH 137
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 247 HVP 255
+VP
Sbjct: 59 YVP 61
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 89.4 bits (212), Expect = 2e-18
Identities = 38/76 (50%), Positives = 53/76 (69%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 434
RAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 435 KLADQCTGLQGFLIFH 482
K A+ C LQGF + H
Sbjct: 122 KEAENCDCLQGFQVCH 137
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDL--QLERINVYYNEASGGR 58
Query: 247 HVP 255
+VP
Sbjct: 59 YVP 61
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 89.4 bits (212), Expect = 2e-18
Identities = 38/76 (50%), Positives = 52/76 (68%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 434
RAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVR 121
Query: 435 KLADQCTGLQGFLIFH 482
K A+ C LQGF + H
Sbjct: 122 KEAENCDCLQGFQVCH 137
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDL--QLERVNVYYNEASCGR 58
Query: 247 HVP 255
VP
Sbjct: 59 FVP 61
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 89.4 bits (212), Expect = 2e-18
Identities = 38/76 (50%), Positives = 53/76 (69%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 434
RAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 435 KLADQCTGLQGFLIFH 482
K A+ C LQGF + H
Sbjct: 122 KEAENCDCLQGFQVCH 137
Score = 47.6 bits (108), Expect = 7e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 247 HVP 255
VP
Sbjct: 59 FVP 61
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 87.4 bits (207), Expect = 7e-18
Identities = 38/71 (53%), Positives = 50/71 (70%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 434
RAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 435 KLADQCTGLQG 467
K A+ C LQG
Sbjct: 122 KEAENCDCLQG 132
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDL--QLERVNVYYNEASCGR 58
Query: 247 HVP 255
VP
Sbjct: 59 FVP 61
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/70 (47%), Positives = 47/70 (67%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 434
RAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 435 KLADQCTGLQ 464
K A+ C LQ
Sbjct: 122 KEAENCDCLQ 131
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTY--TGTSPQQLERINVYFNEASGGR 58
Query: 247 HVP 255
HVP
Sbjct: 59 HVP 61
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/78 (35%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 428
RA+ VDLEP V++ ++ YR L++ E + + A NN+A G++ G+++VD ++D
Sbjct: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIMDM 121
Query: 429 IRKLADQCTGLQGFLIFH 482
I + AD L+GF++ H
Sbjct: 122 IDREADGSDSLEGFVLCH 139
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/62 (41%), Positives = 34/62 (54%)
Frame = +1
Query: 70 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 249
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 250 VP 255
+P
Sbjct: 61 IP 62
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 30.7 bits (66), Expect = 0.91
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 206 SSPPPMVLSVGIWPSGWMPCSR 141
S P P+ LS I SGW+PCSR
Sbjct: 147 SMPYPITLSAVISLSGWLPCSR 168
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 203 SPPPMVLSVGIWPSGWMPCSR 141
+P P+ LSV + SGW+PC+R
Sbjct: 149 NPYPVNLSVSVGLSGWLPCAR 169
>08_02_0647 - 19687142-19687145,19687244-19689352,19689764-19690617
Length = 988
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -2
Query: 332 WMKQLSVCASADLINNSRFKIDEDSTGTCLPAPVSLKKVLKESSPPPMVLS 180
WM LS D IN +F +++ +PA +SLK L+ES +V+S
Sbjct: 783 WMSSLSELTFLD-INVKQFGVEDMKILQNMPALLSLKLYLEESPQETLVIS 832
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 200 PPPMVLSVGIWPSGWMPCSR 141
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>10_03_0016 -
7099862-7099967,7100059-7100357,7101862-7102171,
7104402-7105054,7105266-7105554,7106549-7106634
Length = 580
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 323 VSSRTTYYW*GRCGQQLCPWSLHHWK 400
VS+RTTY +C Q CPW +H +K
Sbjct: 239 VSNRTTYKV--KCTQAGCPWRVHGYK 262
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 167 ARCPQTRPSGVETILSTLSSARPE 238
+RCPQ RPS + +LS L ARP+
Sbjct: 969 SRCPQERPS-MREVLSMLQEARPK 991
>12_02_0399 - 18600444-18600591,18600626-18601656
Length = 392
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 323 VSSRTTYYW*GRCGQQLCPWSLHHWK 400
+S+RTTY +C Q CPW +H +K
Sbjct: 240 ISNRTTYDV--KCTQAGCPWRVHGYK 263
>07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738
Length = 400
Score = 28.3 bits (60), Expect = 4.8
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 396 QWCSDHGHSCWPHLP 352
++ S+HGHSCW +P
Sbjct: 26 RYISEHGHSCWSSVP 40
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 110 RSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPE 238
++ M A T+ S +S P + PSGV L + SSA PE
Sbjct: 690 QTAMAASQATSISRGASQPLAVPNSMPSGVNFPLQSSSSAPPE 732
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 194 PMVLSVGIWPSGWMPCSR 141
P+ LS I SGW+PCSR
Sbjct: 184 PVTLSAVIGLSGWLPCSR 201
>02_01_0471 -
3364215-3364912,3365511-3365742,3365827-3366198,
3366324-3366449,3367056-3367262,3367399-3367492,
3367575-3367621,3367705-3368157,3368261-3368560,
3368656-3369114,3369189-3369410,3369659-3369890,
3370051-3370422,3371210-3371322,3371682-3371903,
3371977-3372180,3372308-3372572,3373123-3373311,
3373441-3373768,3373843-3374248,3374339-3374648,
3375677-3375837,3376825-3376998,3377265-3377609,
3377713-3377754,3378585-3378734,3378847-3379002,
3379088-3379540,3379651-3379966,3380402-3380839,
3381475-3381697,3383538-3383852,3384033-3384095,
3384699-3384903,3385362-3385425,3386014-3386204
Length = 3048
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 207 FFQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 344
F HF+Q + W+ + VD EP + D+ G R HP ++I
Sbjct: 95 FIMHFVQAFKEWEPQYTEQSVDQEP-ISDDTVLGCSRG--HPSEII 137
>10_08_0253 -
16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 128 GSFTAWSTASSLMARCPQTRPS-GVETILSTLSSARP 235
GSF+A + A+ L+ARCP R V + ST P
Sbjct: 5 GSFSAAAAAARLLARCPALRADPRVLALASTAGGGGP 41
>07_03_1027 -
23371826-23372006,23372110-23372171,23372595-23374335,
23374609-23374704,23374967-23375043,23376807-23377307
Length = 885
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 495 LHRRSGRSGILADRYTGQRACGFCPK-PNLRFPF 397
LH + RSG ADR+T C K P PF
Sbjct: 306 LHALAIRSGSFADRFTANALLNLCIKLPGFHHPF 339
>06_03_0735 - 23987349-23989196
Length = 615
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 495 LHRRSGRSGILADRYTGQRACGF 427
LH R+ R+G+LADRY F
Sbjct: 60 LHGRAARAGLLADRYLANALLAF 82
>04_04_1181 + 31526672-31527099,31527580-31527677,31527923-31528089
Length = 230
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 95 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPCCLRRS 274
AKPE+ S +P + T ++ASS R + +GV ++ ++ +A Y RR+
Sbjct: 72 AKPEAASAIPRATATITASASSAPPRRSVSVAAGVACAVAAVAVVGVAVAVAYVVRARRA 131
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,413,142
Number of Sequences: 37544
Number of extensions: 399222
Number of successful extensions: 1356
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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