Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0189
(591 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 162 1e-40
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 162 1e-40
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 162 1e-40
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 162 1e-40
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 161 2e-40
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 161 2e-40
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 157 7e-39
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 93 2e-19
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 91 5e-19
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 91 5e-19
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 91 5e-19
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 89 2e-18
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 89 3e-18
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 89 3e-18
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 88 4e-18
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 84 6e-17
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 57 1e-08
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 56 1e-08
At4g38980.1 68417.m05523 expressed protein 34 0.082
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 1.8
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 2.3
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 29 2.3
At5g58670.1 68418.m07351 phosphoinositide-specific phospholipase... 27 7.1
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 27 7.1
At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger) fa... 27 7.1
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 27 7.1
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 27 7.1
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 27 9.4
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 27 9.4
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 27 9.4
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 27 9.4
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 27 9.4
At3g23790.1 68416.m02990 AMP-binding protein, putative similar t... 27 9.4
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 162 bits (394), Expect = 1e-40
Identities = 82/125 (65%), Positives = 89/125 (71%)
Frame = +3
Query: 210 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 389
F F + + RAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 390 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPVDYGKKSKLE 569
TIGKEIVDL LDRIRKLAD CTGLQGFL+F+ VDYGKKSKL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 570 FRHLP 584
F P
Sbjct: 169 FTVYP 173
Score = 140 bits (338), Expect = 8e-34
Identities = 56/63 (88%), Positives = 62/63 (98%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 247 HVP 255
HVP
Sbjct: 61 HVP 63
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 162 bits (394), Expect = 1e-40
Identities = 82/125 (65%), Positives = 89/125 (71%)
Frame = +3
Query: 210 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 389
F F + + RAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 390 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPVDYGKKSKLE 569
TIGKEIVDL LDRIRKLAD CTGLQGFL+F+ VDYGKKSKL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 570 FRHLP 584
F P
Sbjct: 169 FTVYP 173
Score = 140 bits (338), Expect = 8e-34
Identities = 56/63 (88%), Positives = 62/63 (98%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 247 HVP 255
HVP
Sbjct: 61 HVP 63
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 162 bits (394), Expect = 1e-40
Identities = 82/125 (65%), Positives = 89/125 (71%)
Frame = +3
Query: 210 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 389
F F + + RAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 390 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPVDYGKKSKLE 569
TIGKEIVDL LDRIRKLAD CTGLQGFL+F+ VDYGKKSKL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 570 FRHLP 584
F P
Sbjct: 169 FTVYP 173
Score = 141 bits (341), Expect = 4e-34
Identities = 56/63 (88%), Positives = 63/63 (100%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 247 HVP 255
HVP
Sbjct: 61 HVP 63
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 162 bits (394), Expect = 1e-40
Identities = 82/125 (65%), Positives = 89/125 (71%)
Frame = +3
Query: 210 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 389
F F + + RAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 390 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPVDYGKKSKLE 569
TIGKEIVDL LDRIRKLAD CTGLQGFL+F+ VDYGKKSKL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 570 FRHLP 584
F P
Sbjct: 169 FTVYP 173
Score = 141 bits (341), Expect = 4e-34
Identities = 56/63 (88%), Positives = 63/63 (100%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 247 HVP 255
HVP
Sbjct: 61 HVP 63
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 161 bits (392), Expect = 2e-40
Identities = 80/125 (64%), Positives = 89/125 (71%)
Frame = +3
Query: 210 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 389
F F + + RAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 390 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPVDYGKKSKLE 569
T+GKEIVDL LDR+RKLAD CTGLQGFL+F+ VDYGKKSKL
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 570 FRHLP 584
F P
Sbjct: 169 FTIYP 173
Score = 122 bits (295), Expect = 1e-28
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 247 HVP 255
HVP
Sbjct: 61 HVP 63
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 161 bits (392), Expect = 2e-40
Identities = 80/125 (64%), Positives = 89/125 (71%)
Frame = +3
Query: 210 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 389
F F + + RAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 390 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPVDYGKKSKLE 569
T+GKEIVDL LDR+RKLAD CTGLQGFL+F+ VDYGKKSKL
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 570 FRHLP 584
F P
Sbjct: 169 FTIYP 173
Score = 122 bits (295), Expect = 1e-28
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 247 HVP 255
HVP
Sbjct: 61 HVP 63
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 157 bits (380), Expect = 7e-39
Identities = 77/125 (61%), Positives = 88/125 (70%)
Frame = +3
Query: 210 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 389
F F S Q RAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 390 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPVDYGKKSKLE 569
T+G+EIVD L+R+RKLAD CTGLQGFL+F+ VD+GKKSKL
Sbjct: 109 TVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLG 168
Query: 570 FRHLP 584
F P
Sbjct: 169 FTIYP 173
Score = 117 bits (282), Expect = 5e-27
Identities = 46/63 (73%), Positives = 56/63 (88%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 247 HVP 255
HVP
Sbjct: 61 HVP 63
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 92.7 bits (220), Expect = 2e-19
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 434
RA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVR 121
Query: 435 KLADQCTGLQGFLIFH 482
K A+ C LQGF + H
Sbjct: 122 KEAENCDCLQGFQVCH 137
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 237
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 238 AGKHVP 255
G++VP
Sbjct: 56 CGRYVP 61
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 91.1 bits (216), Expect = 5e-19
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 434
RAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 435 KLADQCTGLQGFLIFH 482
K A+ C LQGF + H
Sbjct: 122 KEAENCDCLQGFQVCH 137
Score = 47.2 bits (107), Expect = 8e-06
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 247 HVP 255
VP
Sbjct: 59 FVP 61
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 91.1 bits (216), Expect = 5e-19
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 434
RAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 435 KLADQCTGLQGFLIFH 482
K A+ C LQGF + H
Sbjct: 122 KEAENCDCLQGFQVCH 137
Score = 48.0 bits (109), Expect = 5e-06
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 247 HVP 255
+VP
Sbjct: 59 YVP 61
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 91.1 bits (216), Expect = 5e-19
Identities = 38/76 (50%), Positives = 53/76 (69%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 434
RAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 63 RAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVR 122
Query: 435 KLADQCTGLQGFLIFH 482
K A+ C LQGF + H
Sbjct: 123 KEAENCDCLQGFQVCH 138
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 247 HVP 255
+VP
Sbjct: 60 YVP 62
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 89.4 bits (212), Expect = 2e-18
Identities = 37/76 (48%), Positives = 53/76 (69%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 434
RAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 63 RAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVR 122
Query: 435 KLADQCTGLQGFLIFH 482
K A+ C LQGF + H
Sbjct: 123 KEAENCDCLQGFQVCH 138
Score = 50.4 bits (115), Expect = 9e-07
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 247 HVP 255
+VP
Sbjct: 60 YVP 62
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 88.6 bits (210), Expect = 3e-18
Identities = 38/76 (50%), Positives = 52/76 (68%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 434
RAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 435 KLADQCTGLQGFLIFH 482
K A+ C LQGF + H
Sbjct: 122 KEAENCDCLQGFQVCH 137
Score = 52.4 bits (120), Expect = 2e-07
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 247 HVP 255
VP
Sbjct: 59 FVP 61
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 88.6 bits (210), Expect = 3e-18
Identities = 38/76 (50%), Positives = 52/76 (68%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 434
RAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 435 KLADQCTGLQGFLIFH 482
K A+ C LQGF + H
Sbjct: 122 KEAENCDCLQGFQVCH 137
Score = 52.4 bits (120), Expect = 2e-07
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 247 HVP 255
VP
Sbjct: 59 FVP 61
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 88.2 bits (209), Expect = 4e-18
Identities = 37/76 (48%), Positives = 53/76 (69%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 434
RAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 435 KLADQCTGLQGFLIFH 482
K A+ C LQGF + H
Sbjct: 122 KEAENCDCLQGFQVCH 137
Score = 52.0 bits (119), Expect = 3e-07
Identities = 26/63 (41%), Positives = 34/63 (53%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 247 HVP 255
+VP
Sbjct: 59 YVP 61
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 84.2 bits (199), Expect = 6e-17
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 434
RAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 435 KLADQCTGLQGFLIFH 482
K A+ LQGF + H
Sbjct: 122 KEAENSDCLQGFQVCH 137
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +1
Query: 67 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 246
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 247 HVP 255
+VP
Sbjct: 59 YVP 61
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 428
RA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMDM 121
Query: 429 IRKLADQCTGLQGFLIFH 482
I + AD L+GF++ H
Sbjct: 122 IDREADGSDSLEGFVLCH 139
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/62 (41%), Positives = 34/62 (54%)
Frame = +1
Query: 70 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 249
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 250 VP 255
+P
Sbjct: 61 IP 62
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +3
Query: 255 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 428
RA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMDM 121
Query: 429 IRKLADQCTGLQGFLIFH 482
I + AD L+GF++ H
Sbjct: 122 IDREADGSDSLEGFVLCH 139
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/62 (41%), Positives = 34/62 (54%)
Frame = +1
Query: 70 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 249
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 250 VP 255
+P
Sbjct: 61 IP 62
>At4g38980.1 68417.m05523 expressed protein
Length = 280
Score = 33.9 bits (74), Expect = 0.082
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Frame = -2
Query: 542 NGRDAPSIRK*TRAGTSTEGVEDQESLQTGTLVSELADSVQNQIY--DFLS----NXXXX 381
NG P+ T G E +E+ S+ G E SV +Q++ DF+S +
Sbjct: 139 NGNREPADGSKTDLG-GVESIEEDGSVSNGEAKEEKPASVSSQVFKDDFMSTYVEDNAED 197
Query: 380 XXXXXGRIFLTSNKLFWMKQLSVCASAD----LINNSRFKIDEDSTGTCLPAPVSLKKVL 213
+ +TS ++F + L V D L+ + +DE ST LP P++ +V+
Sbjct: 198 CNVTEDPVKVTSQEIFKVWDLEVVGDNDEEDGLVLQLKKALDESSTVQPLPQPLNDDQVV 257
Query: 212 KESS 201
E S
Sbjct: 258 SEKS 261
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 503 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 405
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 236 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 111
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 290 NNSRFKIDEDSTGTCLPAPVSLKKVLKESSPPPM 189
N R K S+ + L APV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At5g58670.1 68418.m07351 phosphoinositide-specific phospholipase C
(PLC1) identical to phosphoinositide specific
phospholipase C [Arabidopsis thaliana] GI:902923
Length = 561
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 263 DSTGTCLPAPVSLK-KVLKESSPPPMVLSVGI 171
D T C P+P SLK K+L + PP L I
Sbjct: 228 DETTECFPSPESLKNKILISTKPPKEYLQTQI 259
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 27.5 bits (58), Expect = 7.1
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -1
Query: 435 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 346
C P PN + PF+W ++ + ++P++
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 165
>At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 346
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 173 CPQTRPSGVETILSTLSSARPELASTYPCCLRRS*TYCC**GPHWH 310
CP R SG+ + + LS++ E ST CC++ +C WH
Sbjct: 242 CPNPRCSGLMS-KTELSTSTEEDVSTRTCCVKCGEPFCINCKVPWH 286
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 27.5 bits (58), Expect = 7.1
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -1
Query: 255 GYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---LDSG-LANV 88
G+ + SG + E + ++ D + H A DA+++ T +D G ANV
Sbjct: 754 GWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDVGSAANV 813
Query: 87 YRDALTHF 64
YR LTHF
Sbjct: 814 YRIVLTHF 821
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 27.5 bits (58), Expect = 7.1
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -1
Query: 435 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 346
C P PN + PF+W ++ + ++P++
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 182
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 231 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 61
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 231 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 61
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 231 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 61
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 231 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 61
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 178 WASGHQAGCRAPGSKAPSRHYRSGLR 101
W+SGHQ CR G + ++GLR
Sbjct: 90 WSSGHQRNCRDYGITTLTPSAKNGLR 115
>At3g23790.1 68416.m02990 AMP-binding protein, putative similar to
AMP-binding protein GB:CAA96521 from [Brassica napus]
(Plant Mol. Biol. (1997) 33 (5), 911-922); contains Pfam
AMP-binding enzyme domain PF00501; identical to cDNA
acyl-CoA synthetase-like protein GI:20799732
Length = 722
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -2
Query: 293 INNSRFKIDEDSTGTCLPAPVSLKKVLKESSPPPM 189
I ++ FKI + TGT LP P S K ++K PP M
Sbjct: 506 IKDTEFKIVDHETGTVLP-PGS-KGIVKVRGPPVM 538
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,498,597
Number of Sequences: 28952
Number of extensions: 294924
Number of successful extensions: 966
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1171109464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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