Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0186
(705 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 194 4e-50
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 194 4e-50
SB_56| Best HMM Match : Actin (HMM E-Value=0) 194 4e-50
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 194 4e-50
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 5e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 3e-29
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 2e-22
SB_54| Best HMM Match : Actin (HMM E-Value=0) 97 2e-20
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 76 2e-14
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 73 2e-13
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 67 1e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 52 6e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 40 0.001
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 35 0.074
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.098
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 34 0.098
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 34 0.098
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.098
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 34 0.098
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.098
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 34 0.13
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 32 0.52
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 32 0.52
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 32 0.52
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 32 0.52
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 32 0.52
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 32 0.52
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.69
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 31 0.91
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 31 1.2
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 1.2
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 2.1
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.1
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 3.7
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 29 3.7
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 3.7
SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 29 4.9
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 29 4.9
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.9
SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 29 4.9
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 29 4.9
SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) 29 4.9
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_47152| Best HMM Match : Vicilin_N (HMM E-Value=5.4) 29 4.9
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 29 4.9
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.9
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 28 6.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 28 6.4
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 28 6.4
SB_11456| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40) 28 6.4
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 28 8.5
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 194 bits (474), Expect = 4e-50
Identities = 99/134 (73%), Positives = 101/134 (75%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 436 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT* 615
QIMFETFN+PAMYVAIQAVLSLYAS P + P
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDL 181
Query: 616 PGRDLTDYLMKILT 657
GRDLTDYLMKILT
Sbjct: 182 AGRDLTDYLMKILT 195
Score = 127 bits (306), Expect = 1e-29
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +2
Query: 74 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 253
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 254 TK 259
+K
Sbjct: 61 SK 62
Score = 74.5 bits (175), Expect = 7e-14
Identities = 32/35 (91%), Positives = 35/35 (100%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDL
Sbjct: 147 GRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDL 181
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 194 bits (474), Expect = 4e-50
Identities = 99/134 (73%), Positives = 101/134 (75%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 436 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT* 615
QIMFETFN+PAMYVAIQAVLSLYAS P + P
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Query: 616 PGRDLTDYLMKILT 657
GRDLTDYLMKILT
Sbjct: 181 AGRDLTDYLMKILT 194
Score = 124 bits (299), Expect = 7e-29
Identities = 56/60 (93%), Positives = 60/60 (100%)
Frame = +2
Query: 80 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ+K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDL
Sbjct: 146 GRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 194 bits (474), Expect = 4e-50
Identities = 99/134 (73%), Positives = 101/134 (75%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 436 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT* 615
QIMFETFN+PAMYVAIQAVLSLYAS P + P
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Query: 616 PGRDLTDYLMKILT 657
GRDLTDYLMKILT
Sbjct: 181 AGRDLTDYLMKILT 194
Score = 125 bits (302), Expect = 3e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +2
Query: 80 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ+K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDL
Sbjct: 146 GRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 194 bits (474), Expect = 4e-50
Identities = 99/134 (73%), Positives = 101/134 (75%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 436 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT* 615
QIMFETFN+PAMYVAIQAVLSLYAS P + P
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 181
Query: 616 PGRDLTDYLMKILT 657
GRDLTDYLMKILT
Sbjct: 182 AGRDLTDYLMKILT 195
Score = 131 bits (317), Expect = 5e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +2
Query: 74 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 254 TK 259
+K
Sbjct: 61 SK 62
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDL
Sbjct: 147 GRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 181
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 184 bits (449), Expect = 5e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS 510
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146
Score = 127 bits (306), Expect = 1e-29
Identities = 56/62 (90%), Positives = 61/62 (98%)
Frame = +2
Query: 74 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 253
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 254 TK 259
+K
Sbjct: 61 SK 62
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/27 (85%), Positives = 25/27 (92%), Gaps = 2/27 (7%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYE--GYA 584
GRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 147 GRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 125 bits (302), Expect = 3e-29
Identities = 56/60 (93%), Positives = 60/60 (100%)
Frame = +2
Query: 80 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ+K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 74.5 bits (175), Expect = 7e-14
Identities = 32/35 (91%), Positives = 35/35 (100%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDL
Sbjct: 109 GRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDL 143
Score = 63.3 bits (147), Expect = 2e-10
Identities = 40/80 (50%), Positives = 44/80 (55%)
Frame = +1
Query: 418 NREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTP 597
N + M +IMFETFN+PAMYVAIQAVLSLYAS P + P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 598 SCVWT*PGRDLTDYLMKILT 657
GRDLTDYLMKILT
Sbjct: 138 IIRLDLAGRDLTDYLMKILT 157
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTF 345
KRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 102 bits (245), Expect = 2e-22
Identities = 53/133 (39%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
Frame = +1
Query: 259 RGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 435
R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM
Sbjct: 65 RYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMI 124
Query: 436 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT* 615
++MFE + +Y+AIQAVL+LYA + CP + P +
Sbjct: 125 EVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDI 184
Query: 616 PGRDLTDYLMKIL 654
GRD+T YL+K++
Sbjct: 185 AGRDITKYLIKLM 197
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +2
Query: 92 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 250
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 96.7 bits (230), Expect = 2e-20
Identities = 52/111 (46%), Positives = 68/111 (61%)
Frame = +1
Query: 325 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 504
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 505 ASVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PGRDLTDYLMKILT 657
AS + + P P + GRDLT YL +++T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVT 2239
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/57 (57%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLT-RSRPHRLPHEDPHPSAGYSF 677
GRTTG V D GDGVSHTVP+Y+GY LPHA R+DL R H L + GYSF
Sbjct: 2191 GRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYL--QRLVTERGYSF 2245
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 98 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 199
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 76.2 bits (179), Expect = 2e-14
Identities = 31/46 (67%), Positives = 41/46 (89%)
Frame = +1
Query: 373 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 510
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYAT 171
Score = 66.9 bits (156), Expect = 1e-11
Identities = 26/35 (74%), Positives = 34/35 (97%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+
Sbjct: 172 GRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDI 206
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTG+V DSGDGVSH VPIYEGYALPHAILRLDL
Sbjct: 25 GRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDL 59
Score = 54.8 bits (126), Expect = 6e-08
Identities = 34/73 (46%), Positives = 40/73 (54%)
Frame = +1
Query: 439 IMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 618
IMFE FN+PA+YVAIQAVLSLYAS + P + P
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 619 GRDLTDYLMKILT 657
GRDLTDYLMK++T
Sbjct: 61 GRDLTDYLMKLMT 73
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/76 (35%), Positives = 49/76 (64%)
Frame = +1
Query: 283 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 462
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 463 PAMYVAIQAVLSLYAS 510
PA ++ +VL+ +A+
Sbjct: 63 PAFFLCKNSVLTAFAN 78
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GR+ G+V+DSG + VP+++GY L AI+R L
Sbjct: 79 GRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPL 113
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 199
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.6 bits (118), Expect = 6e-07
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +2
Query: 68 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 238
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 239 GDEAQTK 259
GD A K
Sbjct: 753 GDAAVAK 759
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = +1
Query: 253 DKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 390
DK T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 292 DKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.39
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 519 TGIVLDSGDGVSHTVPI 569
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 196 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 80
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 519 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
TG V+DSGDGV+H +P+ EGY + I + +
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPI 93
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 34.7 bits (76), Expect = 0.074
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 34.3 bits (75), Expect = 0.098
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 34.3 bits (75), Expect = 0.098
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 34.3 bits (75), Expect = 0.098
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 34.3 bits (75), Expect = 0.098
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 34.3 bits (75), Expect = 0.098
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 34.3 bits (75), Expect = 0.098
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 32.3 bits (70), Expect = 0.39
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 358 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWT 537
++A + +P + E N K + +K+ Q M +T + + ++ +A +P W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMT---LLYNMPKIMRKFAFELPN---WA 919
Query: 538 PATVSPTPCPSTKDTHSP-TPSCV 606
P PT P+ K T +P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L CLC + ++LSH + H L +HG R +SCET L T
Sbjct: 854 LTCLCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.69
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 274 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 426
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.69
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 171 GNTARGASSPAKPALHIPEPLSTT 100
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.69
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 171 GNTARGASSPAKPALHIPEPLSTT 100
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 31.1 bits (67), Expect = 0.91
Identities = 21/84 (25%), Positives = 35/84 (41%)
Frame = +1
Query: 340 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 519
T E VAPE + E ++P+ T + ET TP VA + ++ +V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 520 PVSCWTPATVSPTPCPSTKDTHSP 591
+ TV+P + + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +1
Query: 352 ELRVAPE--EHP--VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 519
E +APE E P + E+ P+ MT + ET TP VA + + +++ P
Sbjct: 4372 ETTMAPESTEAPETTMAPESTEAPETTMAPMTTVASETTKTPDTPVAPETNMVAESTLAP 4431
Query: 520 PVSCWTPATVSPTPCPSTKDTHSP 591
+ TV+P + + T SP
Sbjct: 4432 ETTMTPEITVAPKTTMAPETTVSP 4455
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/84 (25%), Positives = 35/84 (41%)
Frame = +1
Query: 340 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 519
T E VAPE + E+ L + +T + ET TP VA + + ++ P
Sbjct: 4915 TMVPETTVAPET--TMAPESTLAAETTMAPVTTVASETTKTPDTTVAPETTMVPEGTLAP 4972
Query: 520 PVSCWTPATVSPTPCPSTKDTHSP 591
+ TV+P + + T +P
Sbjct: 4973 ETTMAPETTVAPETTMAPETTVAP 4996
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = +1
Query: 352 ELRVAPE--EHP--VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 519
E +APE E P ++ E + P+ + T + +T TP A + ++ A+V
Sbjct: 4264 ETTMAPESTEAPETTIVPETTVAPETTKAPETTVASKTTKTPETTFAPETTMAPEATVAE 4323
Query: 520 PVSCWTPATVSPTPCPSTKDTHSPTPSCV 606
+ TV+P + + T +P + V
Sbjct: 4324 ETTMAPVTTVAPETTKAPESTEAPETTMV 4352
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 31.1 bits (67), Expect = 0.91
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Frame = +1
Query: 352 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 519
E APE V T AP + P+ +T + ET PA A++ +L ++VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 520 PVSCWTPATVSP--TPCPSTKDTHSPT--PSCVW 609
+ + TV+P T P+T T P W
Sbjct: 1383 ETTASSETTVAPETTDAPATTLAPETTAAPETTW 1416
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +1
Query: 352 ELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 519
E VAPE L E P+ + +T P VAI++ L+L ++V P
Sbjct: 19 ETTVAPETTSAADTTLAPETTFAPETTVPPESTAAPDTTVAPETTVAIESTLALESTVAP 78
Query: 520 PVSCWTPATVSPTPCPSTKDTHSP 591
+ T TV+P + + T +P
Sbjct: 79 ETTVATETTVAPETTAAPESTLAP 102
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 443 CSKHSTRPPCTSPSKPCSRCTRRSYHRYRAG 535
C H+ R P T+PS PC S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 171 GNTARGASSPAKPALHIPEPLSTT 100
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 399 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 491
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 166 VPLDRGKAPPSGRDGRYGTEGLLCRR*GTDKRGILTLKYPIEHGIVTNW--DDMEKIWHH 339
V L + +GR+ G+ +CR+ K ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 340 TFYN 351
T N
Sbjct: 497 TCPN 500
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 283 PIEHGIVTNWDDMEKIWHHTFYNE 354
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 86 EVAALVVDNGSGMCKAGFAGDDAPRAV 166
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = -3
Query: 262 LFCLCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQ 98
+F CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 461 IFATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNK 519
Query: 97 RGNFFVAHLELVK 59
G V L+ K
Sbjct: 520 HGQVDVLLLDFQK 532
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = -2
Query: 323 SMSSQLVTIPCSMGYLRVRIPLLSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHL 144
+++SQ VT M R +PL+S P + KSP V + P PD + R E HH
Sbjct: 792 ALTSQQVTSSHDMP--RTSMPLVSYPPHMKKSPFVVHHP--PDSAS--RHGNQAPEAHH- 844
Query: 143 LRNRPCTYRS 114
+ P +Y+S
Sbjct: 845 --HEPGSYKS 852
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +3
Query: 357 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVGRTTGIVLD 536
ACR R P P P+ + ++D D +I R P R + V +T G+ +
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260
Query: 537 SGDGVSHTVPI 569
G H VPI
Sbjct: 261 ITGGKEHGVPI 271
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 391 TEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTP 561
T+AP L PK T + ET + PA+ +A + + +V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 562 CPSTKDTHSP 591
+T+ T +P
Sbjct: 575 TAATEITAAP 584
>SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 209
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 92
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 91 NFFVAHLELVK 59
V L+ K
Sbjct: 152 QVDVLLLDFQK 162
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/73 (30%), Positives = 28/73 (38%)
Frame = +1
Query: 379 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPT 558
PVL A P A + TQ + P ++ V + A PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 559 PCPSTKDTHSPTP 597
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 92
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 91 NFFVAHLELVK 59
V L+ K
Sbjct: 152 QVDVLLLDFQK 162
>SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 221
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 92
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 126 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 184
Query: 91 NFFVAHLELVK 59
V L+ K
Sbjct: 185 QVDVLLLDFQK 195
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 473 TSPSKPCSRCTRRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLNPV--ATSQTTS 643
T P+ SR RS YR R P+ + R+R+P R ++PV ++SQ TS
Sbjct: 271 TPPAYRKSRHRSRSLSPYRKKYSRSPSPYWTSVNRVRSPIRPSRPRVSPVYNSSSQKTS 329
>SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015)
Length = 224
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 92
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 43 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 101
Query: 91 NFFVAHLELVK 59
V L+ K
Sbjct: 102 QVDVLLLDFQK 112
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 92
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 715 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 773
Query: 91 NFFVAHLELVK 59
V L+ K
Sbjct: 774 QVDVLLLDFQK 784
>SB_47152| Best HMM Match : Vicilin_N (HMM E-Value=5.4)
Length = 330
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +2
Query: 449 KHSTRPPCTSPSKPCSRCTRRSYHRYRAGLRRRCLPHR-AHLRRI--RTPPRHPASGLNP 619
++ R P T P +P +R R ++ R L H+ +H +R+ ++PPR P +P
Sbjct: 202 RYRQRRPLT-PKRPKTRQLPPE-QRCKSTQSPRILSHQQSHPKRLALKSPPRRPGRKGHP 259
Query: 620 VATSQT 637
V+T QT
Sbjct: 260 VSTQQT 265
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 494 SRCTRRSYHRYRAGLRRRCLPHRAHLR-RIRTPPRHPASGLNPVATSQTTS*RSSPE 661
SR R+ R+R RR P++ H R + RTPPRH +P S RSS E
Sbjct: 64 SRSKSRTPPRHR---RRSRSPNKKHSRSKSRTPPRHRRRSRSPRRESIDRKRRSSYE 117
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -3
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 92
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 799 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 857
Query: 91 NFFVAHLELVK 59
V L+ K
Sbjct: 858 QVDVLLLDFQK 868
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 28.3 bits (60), Expect = 6.4
Identities = 26/92 (28%), Positives = 30/92 (32%), Gaps = 4/92 (4%)
Frame = +1
Query: 337 HTFYNELRVAP--EEHPVLLTEAPLNPKAN--REKMTQIMFETFNTPAMYVAIQAVLSLY 504
HT N AP HP L P+A M + ET P M V
Sbjct: 276 HTISNPAMAAPWVTPHPATLPVTLFTPQAAPVTPPMGAQLPET-EQPQMVAPSSTVTPPV 334
Query: 505 ASVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 600
PP S P PTP + +P PS
Sbjct: 335 TEPAPPSSVVAPPPAVPTPATAPPPVVAPPPS 366
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 171 GNTARGASSPAKPALHIPEPLSTT 100
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 171 GNTARGASSPAKPALHIPEPLSTT 100
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 508 SVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 606
+VVPP+ P V P+P + + SPTPSC+
Sbjct: 209 AVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +1
Query: 535 TPATVSPTPCPSTKDTHSPTPSCVWT*PGRDLTDYLMKILTRARVTRSLTHPPE 696
T T +PT C T + P+C+ P T VT++ T PP+
Sbjct: 106 TYCTSTPTSCTPTTTCYLQVPTCILIPPVNPCTPVTTTCEKTISVTKTQTLPPD 159
>SB_11456| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40)
Length = 391
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 481 IQAVLSLYASVVPPVSCWTP-ATVSPTPCPSTKDTHSP 591
++ +L+A+VV V+CWTP A + S+ H P
Sbjct: 250 VKVTKTLFATVVGFVTCWTPIAVIDMLDAYSSHQVHVP 287
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
Frame = -2
Query: 314 SQLVTIPCSMGYLRVRIPLLSVPHLLHKS---------PSVPYRPSRPDGGAFP 180
S+ ++IP G+ R L P L H S P+ PY PS+ G +FP
Sbjct: 3759 SKPISIPSRDGHARAATSLPGSPQLSHLSGRFSSDDVSPTPPYSPSQKQGFSFP 3812
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 27.9 bits (59), Expect = 8.5
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 11/100 (11%)
Frame = +1
Query: 331 WHHTFYNELRVAPEEH----PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 498
+ H Y + P H P T P P+ + + ++ + P+ ++ +
Sbjct: 170 YKHPSYPTYNIPPTPHTSIPPTPHTSIPPTPRPTYKHPSYPSYKHPSYPSSHIQASLLPH 229
Query: 499 LYASVVPPVSCW------TPAT-VSPTPCPSTKDTHSPTP 597
+ AS++P + TP T + PTP P T +PTP
Sbjct: 230 IQASLLPLIPNTSIPPTPTPHTSIPPTPTPHTSIPPTPTP 269
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,644,666
Number of Sequences: 59808
Number of extensions: 686880
Number of successful extensions: 2803
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 2292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2756
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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