Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0186
(705 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 195 3e-50
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 193 1e-49
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 193 1e-49
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 193 1e-49
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 192 1e-49
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 192 1e-49
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 189 1e-48
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 188 2e-48
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 188 2e-48
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 167 5e-42
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 162 2e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 161 5e-40
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 109 2e-24
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 95 3e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 83 2e-16
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 68 5e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 2e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 57 1e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 50 2e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.11
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 31 0.56
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 31 0.98
At3g28790.1 68416.m03593 expressed protein 30 1.3
At5g18270.2 68418.m02148 no apical meristem (NAM) family protein... 30 1.7
At5g18270.1 68418.m02147 no apical meristem (NAM) family protein... 30 1.7
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 30 1.7
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 29 2.3
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 29 2.3
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 3.0
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 3.0
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 29 3.0
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 29 4.0
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 29 4.0
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 29 4.0
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 4.0
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 4.0
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 5.2
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 9.2
At1g11130.1 68414.m01274 leucine-rich repeat family protein / pr... 27 9.2
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 27 9.2
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 195 bits (475), Expect = 3e-50
Identities = 102/135 (75%), Positives = 106/135 (78%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 612
QIMFETFNTPAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 613 *PGRDLTDYLMKILT 657
GRDLTDYLMKILT
Sbjct: 182 LAGRDLTDYLMKILT 196
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 77.4 bits (182), Expect = 9e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 193 bits (470), Expect = 1e-49
Identities = 99/135 (73%), Positives = 106/135 (78%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 612
QIMFETFN+PAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAILRLD 181
Query: 613 *PGRDLTDYLMKILT 657
GRDLTDYLMKILT
Sbjct: 182 LAGRDLTDYLMKILT 196
Score = 105 bits (251), Expect = 4e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ+K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 74.5 bits (175), Expect = 6e-14
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDL
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDL 182
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 193 bits (470), Expect = 1e-49
Identities = 99/135 (73%), Positives = 106/135 (78%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 612
QIMFETFN+PAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAILRLD 181
Query: 613 *PGRDLTDYLMKILT 657
GRDLTDYLMKILT
Sbjct: 182 LAGRDLTDYLMKILT 196
Score = 105 bits (251), Expect = 4e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ+K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 74.5 bits (175), Expect = 6e-14
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDL
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDL 182
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 193 bits (470), Expect = 1e-49
Identities = 99/135 (73%), Positives = 106/135 (78%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 612
QIMFETFN+PAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAILRLD 181
Query: 613 *PGRDLTDYLMKILT 657
GRDLTDYLMKILT
Sbjct: 182 LAGRDLTDYLMKILT 196
Score = 105 bits (251), Expect = 4e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ+K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 74.5 bits (175), Expect = 6e-14
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDL
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDL 182
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 192 bits (469), Expect = 1e-49
Identities = 101/135 (74%), Positives = 105/135 (77%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 612
QIMFETFNTPAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 613 *PGRDLTDYLMKILT 657
GRDLTD+LMKILT
Sbjct: 182 LAGRDLTDHLMKILT 196
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 77.4 bits (182), Expect = 9e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 192 bits (469), Expect = 1e-49
Identities = 101/135 (74%), Positives = 105/135 (77%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 612
QIMFETFNTPAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 613 *PGRDLTDYLMKILT 657
GRDLTD+LMKILT
Sbjct: 182 LAGRDLTDHLMKILT 196
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 77.4 bits (182), Expect = 9e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 189 bits (461), Expect = 1e-48
Identities = 100/135 (74%), Positives = 104/135 (77%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 612
QIMFETFN PAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 613 *PGRDLTDYLMKILT 657
GRDLTD LMKILT
Sbjct: 182 LAGRDLTDSLMKILT 196
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 77.4 bits (182), Expect = 9e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 188 bits (459), Expect = 2e-48
Identities = 99/135 (73%), Positives = 103/135 (76%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 612
QIMFETFN PAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 613 *PGRDLTDYLMKILT 657
GRDLTD LMKILT
Sbjct: 182 LAGRDLTDALMKILT 196
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 77.4 bits (182), Expect = 9e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 188 bits (459), Expect = 2e-48
Identities = 99/135 (73%), Positives = 103/135 (76%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 612
QIMFETFN PAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 613 *PGRDLTDYLMKILT 657
GRDLTD LMKILT
Sbjct: 182 LAGRDLTDALMKILT 196
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 77.4 bits (182), Expect = 9e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 167 bits (407), Expect = 5e-42
Identities = 84/134 (62%), Positives = 99/134 (73%), Gaps = 1/134 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
+RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMT
Sbjct: 64 RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMT 123
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 612
QIMFE+F P+MY+ IQAVLSLY+S + + VS T P + P
Sbjct: 124 QIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 182
Query: 613 *PGRDLTDYLMKIL 654
GRDLT+YL KI+
Sbjct: 183 LAGRDLTEYLTKIM 196
Score = 102 bits (244), Expect = 3e-22
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ +
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
Score = 77.4 bits (182), Expect = 9e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 149 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 183
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 162 bits (394), Expect = 2e-40
Identities = 91/158 (57%), Positives = 104/158 (65%), Gaps = 1/158 (0%)
Frame = +1
Query: 202 RDGRYGTEGLLCRR*GTDKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 381
RDG E + G R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 382 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPT 558
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+S V VS T
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 559 PCPSTKDTHSPTPSCVWT*PGRDLTDYLMKILTRARVT 672
P + P GRDLTDYL++I+T T
Sbjct: 154 -VPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYT 190
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL
Sbjct: 137 GRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDL 171
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +2
Query: 98 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE 247
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEE 48
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 161 bits (390), Expect = 5e-40
Identities = 79/133 (59%), Positives = 95/133 (71%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
+ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMT
Sbjct: 18 RSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMT 77
Query: 436 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT* 615
QIMFETF P+MY+ +QA LSL+AS + P + + P
Sbjct: 78 QIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDL 137
Query: 616 PGRDLTDYLMKIL 654
GR LT+YLMKI+
Sbjct: 138 AGRHLTNYLMKIM 150
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
GRTTG VLDSGDGVS+ VPIYEG ALPHAILRLDL
Sbjct: 103 GRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDL 137
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 109 bits (262), Expect = 2e-24
Identities = 45/86 (52%), Positives = 62/86 (72%)
Frame = +1
Query: 250 TDKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 429
++ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 430 MTQIMFETFNTPAMYVAIQAVLSLYA 507
M + MFE +N +++ IQAVL+LYA
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYA 145
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +2
Query: 98 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 244
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
G TG+V+DSGDGV+H VP+ +GY+ PH R+++
Sbjct: 147 GLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNV 181
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 95.5 bits (227), Expect = 3e-20
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = +1
Query: 274 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 453
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 454 FNTPAMYVAIQAVLSLYA 507
FN P +Y+A+ +VL+L A
Sbjct: 146 FNVPGLYIAVNSVLALAA 163
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 519 TGIVLDSGDGVSHTVPIYEGYALPHAI 599
TG+V+D GDG +H VP+ EGY + I
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCI 199
Score = 35.9 bits (79), Expect = 0.026
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 95 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 181
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 82.6 bits (195), Expect = 2e-16
Identities = 35/85 (41%), Positives = 56/85 (65%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS 510
++MFE + PA+++A VL+ +A+
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFAT 169
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 184
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 602
GR T +V+D G G + P+++GY L A++
Sbjct: 170 GRATSLVVDCGGGSTTISPVHDGYVLQKAVV 200
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 68.1 bits (159), Expect = 5e-12
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +1
Query: 283 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 459
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 460 TPAMYVAIQAVLSLYA 507
Y + QAVLSLYA
Sbjct: 117 VSGFYASEQAVLSLYA 132
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 95 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 187
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 429
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 184
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +1
Query: 274 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 453
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 454 FNTPAMYVA-IQAVLSLYASVVPPVS 528
F ++Y+A Q+++ LY + P S
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDS 146
Score = 35.9 bits (79), Expect = 0.026
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 441 HVRNIQHARHVRRHPSRALAVRVGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 614
H +++ H R P L+ +V+D G +H VP+ + L HAI R+DL
Sbjct: 130 HPQSLVHLYEASRQPDSILSKT---QCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDL 184
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 98 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 190
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +1
Query: 283 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 459
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 460 TPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHS 588
PA+ + A S + + + C V CP THS
Sbjct: 145 VPAVAFGVDAAFSYKYNQLHGI-CKKDGIVL---CPGFTTTHS 183
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2
Query: 98 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 244
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 219 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 82
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 508 SVVPPVSCWTPATVSPTPCPSTKDT-HSPTPSC 603
S+ PP+SC TP PCP + HS T C
Sbjct: 644 SIPPPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 30.7 bits (66), Expect = 0.98
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 494 SRCTRRSYHRYRAGLRRRCL-PHRAHLRRIRTPPRHPASG 610
S T +SY ++AG R R L P + L +R PPR PA+G
Sbjct: 594 STATSKSY-TFKAGDRVRFLGPSTSSLASLRAPPRGPATG 632
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 508 SVVPPVSCWTPATVSP-TPCPSTKDTHSPTPS 600
S P S TP+T +P TP PST +PTPS
Sbjct: 278 SPTPTPSTPTPSTPTPSTPTPSTPTPSTPTPS 309
>At5g18270.2 68418.m02148 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +1
Query: 295 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 468
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 469 MYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPT 594
I +L S +PP+ P+ +S T P+ K + PT
Sbjct: 195 SLENIDHLLDF--SSLPPLI--DPSFMSQTEQPNFKPINPPT 232
>At5g18270.1 68418.m02147 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +1
Query: 295 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 468
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 469 MYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPT 594
I +L S +PP+ P+ +S T P+ K + PT
Sbjct: 195 SLENIDHLLDF--SSLPPLI--DPSFMSQTEQPNFKPINPPT 232
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1
Query: 466 AMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 600
+M AI++ S +A++ PV +P SP+P PS + SP+PS
Sbjct: 509 SMVGAIESRSSTHATIEDPVCEQSP---SPSPSPSPSPSPSPSPS 550
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 517 PPVSCWTPATVSPTPCPSTKDTHSPTP 597
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 517 PPVSCWTPATVSPTPCPSTKDTHSPTP 597
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +1
Query: 340 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 489
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 490 VLSLYAS 510
VL+LYA+
Sbjct: 241 VLALYAA 247
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +1
Query: 340 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 489
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 490 VLSLYAS 510
VL+LYA+
Sbjct: 241 VLALYAA 247
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 508 SVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 600
+ +PPV+ TP+ ++ P P + T +PT S
Sbjct: 36 TALPPVTAETPSPIASPPVPVNEPTPAPTTS 66
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 517 PPVSCWTPATVSPTPCPSTKDTHSPTP 597
PP S TP SP P P + SPTP
Sbjct: 233 PPSSSPTPGPDSPLPSPGPPPSPSPTP 259
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 517 PPVSCWTPATVSPTPCPSTK-DTHSPTPS 600
PP +P P P P+TK D+ SP+PS
Sbjct: 112 PPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 517 PPVSCWTPATVSPTPCPSTK-DTHSPTPS 600
PP +P P P P+TK D+ SP+PS
Sbjct: 112 PPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 268 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 429
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 268 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 429
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 396 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 497
GSP+ +G + E+D D + NI+H + +H + A+
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 195 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 73
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At1g11130.1 68414.m01274 leucine-rich repeat family protein /
protein kinase family protein contains leucine
rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to leucine-rich
repeat transmembrane protein kinase 2 [Zea mays]
gi|3360291|gb|AAC27895
Length = 768
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 514 VPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PGRD 627
+PPVS PA +P + P+P VW+ P D
Sbjct: 270 IPPVSGVPPAPFAPFAPLQPQQHPPPSPPLVWSPPSSD 307
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 627 PHRLPHEDPHPSAGYSFTYPP 689
P LP P P Y FTYPP
Sbjct: 79 PSPLPPPPPPPPPNYVFTYPP 99
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,033,394
Number of Sequences: 28952
Number of extensions: 446526
Number of successful extensions: 1661
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1641
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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