Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0184
(474 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 158 3e-39
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 158 3e-39
SB_56| Best HMM Match : Actin (HMM E-Value=0) 158 3e-39
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 158 3e-39
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 158 3e-39
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 7e-30
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 1e-15
SB_54| Best HMM Match : Actin (HMM E-Value=0) 75 2e-14
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 1e-09
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 58 5e-09
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 57 6e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 52 3e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.21
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.37
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.37
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.37
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.85
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 0.85
SB_18995| Best HMM Match : rve (HMM E-Value=0.0012) 29 2.6
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 28 3.4
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 27 6.0
SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19) 27 6.0
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 7.9
SB_26867| Best HMM Match : Acyltransferase (HMM E-Value=4.4) 27 7.9
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 158 bits (383), Expect = 3e-39
Identities = 70/75 (93%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFN+PAMYVA
Sbjct: 122 QIMFETFNSPAMYVA 136
Score = 128 bits (309), Expect = 2e-30
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 245
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 158 bits (383), Expect = 3e-39
Identities = 70/75 (93%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFN+PAMYVA
Sbjct: 121 QIMFETFNSPAMYVA 135
Score = 125 bits (302), Expect = 2e-29
Identities = 57/61 (93%), Positives = 60/61 (98%)
Frame = +3
Query: 72 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSK 251
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA SK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 252 R 254
R
Sbjct: 62 R 62
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 158 bits (383), Expect = 3e-39
Identities = 70/75 (93%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFN+PAMYVA
Sbjct: 121 QIMFETFNSPAMYVA 135
Score = 126 bits (305), Expect = 7e-30
Identities = 58/61 (95%), Positives = 60/61 (98%)
Frame = +3
Query: 72 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSK 251
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA SK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 252 R 254
R
Sbjct: 62 R 62
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 158 bits (383), Expect = 3e-39
Identities = 70/75 (93%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFN+PAMYVA
Sbjct: 122 QIMFETFNSPAMYVA 136
Score = 132 bits (320), Expect = 1e-31
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 245
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 158 bits (383), Expect = 3e-39
Identities = 70/75 (93%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFN+PAMYVA
Sbjct: 122 QIMFETFNSPAMYVA 136
Score = 128 bits (309), Expect = 2e-30
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 245
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 126 bits (305), Expect = 7e-30
Identities = 57/61 (93%), Positives = 60/61 (98%)
Frame = +3
Query: 72 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSK 251
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA SK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 252 R 254
R
Sbjct: 62 R 62
Score = 57.2 bits (132), Expect = 6e-09
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTF 337
++ ILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 410 NREKMTQIMF*TFNTPAMYVA 472
N + M +IMF TFN+PAMYVA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVA 98
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 79.4 bits (187), Expect = 1e-15
Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +2
Query: 257 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 433
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 434 MF*TFNTPAMYVA 472
MF + +Y+A
Sbjct: 127 MFENYQFEGVYIA 139
Score = 50.8 bits (116), Expect = 6e-07
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAHSKR 254
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLR 65
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/52 (65%), Positives = 41/52 (78%)
Frame = +2
Query: 317 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*TFNTPAMYVA 472
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MF +FN P MYVA
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVA 2180
Score = 59.7 bits (138), Expect = 1e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 191
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 1e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 191
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 57.6 bits (133), Expect = 5e-09
Identities = 23/65 (35%), Positives = 41/65 (63%)
Frame = +2
Query: 275 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*TFNT 454
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MF +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 455 PAMYV 469
PA ++
Sbjct: 63 PAFFL 67
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 57.2 bits (132), Expect = 6e-09
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = +2
Query: 365 EHPVLLTEAPLNPKANREKMTQIMF*TFNTPAMYVA 472
+HPVLLTEAPLNP+ NREK ++ F TFN PA++++
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFIS 161
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.6 bits (118), Expect = 3e-07
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +3
Query: 60 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 230
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 231 GDEAHSK 251
GD A +K
Sbjct: 753 GDAAVAK 759
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 269 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 382
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 32.3 bits (70), Expect = 0.21
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = -2
Query: 188 MAGPSHDRGKHCARSIISCEAGLAHPGAIVYYQRGNFFV 72
MA + D G++ + SI+S E GLAH GAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.37
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 266 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 418
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 163 GNTARGASSPAKPALHIPEPLSTT 92
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 163 GNTARGASSPAKPALHIPEPLSTT 92
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 163 GNTARGASSPAKPALHIPEPLSTT 92
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 30.3 bits (65), Expect = 0.85
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 254 SILTLKYPIEHGIVTNWDDMEKIWHHTFYNE 346
S L P + G + NWD ++IW +TF E
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 78 EVAALVVDNGSGMCKAGFAGDDAPRAV 158
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_18995| Best HMM Match : rve (HMM E-Value=0.0012)
Length = 1225
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 183 GAFPRSRETLREEHHLLRSRPCTSRS 106
G +P S++T R E + +RPCT+ S
Sbjct: 832 GCYPWSKQTFRHEGPPISARPCTAMS 857
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -3
Query: 283 FDGVFEGQDTLLLCASSPT*ESFCPIPTITP*WRGLPT 170
+DGV + + LLL +SSP S PI TP +GL T
Sbjct: 273 YDGVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2162
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = -2
Query: 164 GKHCARSIISCEAGLAHPGAIVYYQRGNFFVAHLELVKLVRCRCD 30
G+HC + I C G GA GN+ E C D
Sbjct: 724 GRHCEKDIDECSLGYCKNGATCTNTPGNYSCQCTEFTNGTNCELD 768
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 163 GNTARGASSPAKPALHIPEPLSTT 92
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 163 GNTARGASSPAKPALHIPEPLSTT 92
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 178 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 68
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 188 SGRDGRYGTEGLLCRR*GT*QKSILTLKYPIEHGIVTNW--DDMEKIWHHTFYN 343
+GR+ G+ +CR+ + ++TL + I G+ + D EK+W+HT N
Sbjct: 451 TGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYHTCPN 500
>SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19)
Length = 1562
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 183 GAFPRSRETLREEHHLLRSRPCTSRS 106
G +P S++T R E +RPCT+ S
Sbjct: 1256 GCYPWSKQTFRHEGPTHTARPCTAMS 1281
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 84 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 188
+ +++D GS KAGFA ++A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_26867| Best HMM Match : Acyltransferase (HMM E-Value=4.4)
Length = 655
Score = 27.1 bits (57), Expect = 7.9
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Frame = -1
Query: 267 RVRILFCYVPHLLHKSPSVPYRPSRPDGGAFPRSRETL----REEHHLLRSRPCTSRSHC 100
+V I+ C H+ H R + DG + R ++E H+L S H
Sbjct: 84 QVEIISCVFNHVTHWFVRATSRDTAYDGSSEDEQRANAINDNKQEKHVLEGTFRDSHPHV 143
Query: 99 LLPTRQLLRRT 67
L R LLR T
Sbjct: 144 LTFKRNLLRST 154
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,045,168
Number of Sequences: 59808
Number of extensions: 403922
Number of successful extensions: 3068
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3066
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 994359969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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