Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0184
(474 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 159 7e-40
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 159 7e-40
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 159 7e-40
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 159 7e-40
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 159 7e-40
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 159 7e-40
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 159 7e-40
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 159 7e-40
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 159 7e-40
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 159 7e-40
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 156 7e-39
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 134 4e-32
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 134 4e-32
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 132 9e-32
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 132 9e-32
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 104 4e-23
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 86 1e-17
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 85 2e-17
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 66 2e-11
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.034
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.034
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 34 0.060
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 1.3
Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical p... 28 3.9
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 3.9
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 3.9
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 3.9
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 3.9
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 3.9
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 6.9
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 159 bits (387), Expect = 7e-40
Identities = 71/75 (94%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFNTPAMYVA
Sbjct: 122 QIMFETFNTPAMYVA 136
Score = 134 bits (323), Expect = 4e-32
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 159 bits (387), Expect = 7e-40
Identities = 71/75 (94%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFNTPAMYVA
Sbjct: 122 QIMFETFNTPAMYVA 136
Score = 132 bits (320), Expect = 9e-32
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 245
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 159 bits (387), Expect = 7e-40
Identities = 71/75 (94%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFNTPAMYVA
Sbjct: 122 QIMFETFNTPAMYVA 136
Score = 134 bits (323), Expect = 4e-32
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 159 bits (387), Expect = 7e-40
Identities = 71/75 (94%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFNTPAMYVA
Sbjct: 122 QIMFETFNTPAMYVA 136
Score = 134 bits (323), Expect = 4e-32
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 159 bits (387), Expect = 7e-40
Identities = 71/75 (94%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFNTPAMYVA
Sbjct: 122 QIMFETFNTPAMYVA 136
Score = 134 bits (323), Expect = 4e-32
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 159 bits (387), Expect = 7e-40
Identities = 71/75 (94%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFNTPAMYVA
Sbjct: 122 QIMFETFNTPAMYVA 136
Score = 131 bits (316), Expect = 3e-31
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 245
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 159 bits (387), Expect = 7e-40
Identities = 71/75 (94%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFNTPAMYVA
Sbjct: 122 QIMFETFNTPAMYVA 136
Score = 134 bits (323), Expect = 4e-32
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 159 bits (387), Expect = 7e-40
Identities = 71/75 (94%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 18 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 77
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFNTPAMYVA
Sbjct: 78 QIMFETFNTPAMYVA 92
Score = 41.1 bits (92), Expect = 4e-04
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 198 MVGMGQKDSYVGDEAHSKR 254
MVGMGQKDSYVGDEA SKR
Sbjct: 1 MVGMGQKDSYVGDEAQSKR 19
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 159 bits (387), Expect = 7e-40
Identities = 71/75 (94%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 48 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 107
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFNTPAMYVA
Sbjct: 108 QIMFETFNTPAMYVA 122
Score = 95.5 bits (227), Expect = 2e-20
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +3
Query: 120 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSKR 254
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA SKR
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 49
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 159 bits (387), Expect = 7e-40
Identities = 71/75 (94%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFNTPAMYVA
Sbjct: 122 QIMFETFNTPAMYVA 136
Score = 134 bits (323), Expect = 4e-32
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 156 bits (379), Expect = 7e-39
Identities = 68/74 (91%), Positives = 72/74 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMT 120
Query: 428 QIMF*TFNTPAMYV 469
QIMF TFNTPAMYV
Sbjct: 121 QIMFETFNTPAMYV 134
Score = 127 bits (307), Expect = 4e-30
Identities = 58/61 (95%), Positives = 60/61 (98%)
Frame = +3
Query: 72 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSK 251
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA SK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 252 R 254
R
Sbjct: 62 R 62
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 134 bits (323), Expect = 4e-32
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 53.6 bits (123), Expect = 7e-08
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKI 322
++ ILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 134 bits (323), Expect = 4e-32
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 53.6 bits (123), Expect = 7e-08
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKI 322
++ ILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 132 bits (320), Expect = 9e-32
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 245
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 53.6 bits (123), Expect = 7e-08
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKI 322
++ ILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 132 bits (320), Expect = 9e-32
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 245
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 48.0 bits (109), Expect = 3e-06
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDM 313
++ ILTLKYPIEHGIVTNWDDM
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 104 bits (249), Expect = 4e-23
Identities = 42/74 (56%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Frame = +2
Query: 251 KSILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 427
+ + +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+
Sbjct: 65 RGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSA 124
Query: 428 QIMF*TFNTPAMYV 469
+I F TFN PA+Y+
Sbjct: 125 EIFFETFNVPALYI 138
Score = 60.1 bits (139), Expect = 8e-10
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSKR 254
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A S R
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNR 65
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 86.2 bits (204), Expect = 1e-17
Identities = 37/70 (52%), Positives = 46/70 (65%)
Frame = +2
Query: 263 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF* 442
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMF
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 443 TFNTPAMYVA 472
+FN P +Y+A
Sbjct: 140 SFNVPGLYIA 149
Score = 36.7 bits (81), Expect = 0.009
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 173
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 85.0 bits (201), Expect = 2e-17
Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = +2
Query: 251 KSILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMT 427
+ +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM
Sbjct: 65 RQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMF 124
Query: 428 QIMF*TFNTPAMYVA 472
Q+MF + ++YVA
Sbjct: 125 QVMFEQYGFNSIYVA 139
Score = 48.0 bits (109), Expect = 3e-06
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAHSKR 254
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E R
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLR 65
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 65.7 bits (153), Expect = 2e-11
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +2
Query: 278 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*TFNTP 457
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMF F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 458 AMYVA 472
A Y++
Sbjct: 154 AYYLS 158
Score = 33.5 bits (73), Expect = 0.079
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 173
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.034
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +2
Query: 275 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 439
PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.034
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +2
Query: 275 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 439
PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 33.9 bits (74), Expect = 0.060
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = -1
Query: 327 CQIFSMSSQLVTIPC-SMGYLRVRILFCYVPHLLHKSPSVP-YRPSRPD 187
CQ+FS QLVT+ SMG ++++++ ++P L KS + P P+ P+
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPE 299
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 253 LLLCASSPT*ESFCPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATS 77
L++ +SS S TITP +G+PT N S+P P + STT A ++
Sbjct: 465 LVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATST 524
Query: 76 SS 71
+S
Sbjct: 525 AS 526
>Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical
protein C39E9.11 protein.
Length = 405
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -1
Query: 243 VPHLLHKSPSVPYRPSRPDGGAFPRSRETLREEHHLLRSRPCTSRS 106
+P++ S PSRPD G PR + EE ++ P S +
Sbjct: 239 IPYMTMNSSMDVVGPSRPDEGMDPRQMYEMPEEEEDVQEGPSASNA 284
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.9 bits (59), Expect = 3.9
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 349 ACRPRGTPRPAY*GSPQPQGQQREDDPDHVLNIQ---HARHVRRH 474
AC GT PA GSP PQ D ++N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 145 ASSPAKPALHIPEPLSTTNAATSS 74
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.9 bits (59), Expect = 3.9
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 349 ACRPRGTPRPAY*GSPQPQGQQREDDPDHVLNIQ---HARHVRRH 474
AC GT PA GSP PQ D ++N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 145 ASSPAKPALHIPEPLSTTNAATSS 74
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.9 bits (59), Expect = 3.9
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 349 ACRPRGTPRPAY*GSPQPQGQQREDDPDHVLNIQ---HARHVRRH 474
AC GT PA GSP PQ D ++N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 145 ASSPAKPALHIPEPLSTTNAATSS 74
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.9 bits (59), Expect = 3.9
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 349 ACRPRGTPRPAY*GSPQPQGQQREDDPDHVLNIQ---HARHVRRH 474
AC GT PA GSP PQ D ++N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 145 ASSPAKPALHIPEPLSTTNAATSS 74
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 3.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 120 KAGFAGDDAPRAVFPSIVGRPRHQG 194
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 272 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 373
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 272 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 373
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +2
Query: 299 NWDDMEKIWHHTFYNE--LRVAPEEHPV 376
+++D++ IWHH Y E L+ E +PV
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,115,246
Number of Sequences: 27780
Number of extensions: 276846
Number of successful extensions: 935
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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