Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0184
(474 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 158 2e-39
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 157 3e-39
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 157 3e-39
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 156 8e-39
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 155 1e-38
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 155 1e-38
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 155 1e-38
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 155 1e-38
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 155 1e-38
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 140 6e-34
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 139 1e-33
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 138 2e-33
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 91 4e-19
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 84 4e-17
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 74 4e-14
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 2e-10
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 51 3e-07
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 51 3e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 44 5e-05
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.057
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 1.2
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.1
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.1
At2g39050.1 68415.m04800 hydroxyproline-rich glycoprotein family... 28 3.7
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 4.9
At1g79450.2 68414.m09260 LEM3 (ligand-effect modulator 3) family... 27 4.9
At1g79450.1 68414.m09259 LEM3 (ligand-effect modulator 3) family... 27 4.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 158 bits (383), Expect = 2e-39
Identities = 70/75 (93%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFNTPAMYVA
Sbjct: 123 QIMFETFNTPAMYVA 137
Score = 110 bits (265), Expect = 4e-25
Identities = 50/60 (83%), Positives = 54/60 (90%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSKR 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA SKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 157 bits (382), Expect = 3e-39
Identities = 70/75 (93%), Positives = 72/75 (96%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFNTPAMYVA
Sbjct: 123 QIMFETFNTPAMYVA 137
Score = 110 bits (265), Expect = 4e-25
Identities = 50/60 (83%), Positives = 54/60 (90%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSKR 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA SKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 157 bits (382), Expect = 3e-39
Identities = 70/75 (93%), Positives = 72/75 (96%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFNTPAMYVA
Sbjct: 123 QIMFETFNTPAMYVA 137
Score = 110 bits (265), Expect = 4e-25
Identities = 50/60 (83%), Positives = 54/60 (90%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSKR 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA SKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 156 bits (378), Expect = 8e-39
Identities = 69/75 (92%), Positives = 72/75 (96%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFN PAMYVA
Sbjct: 123 QIMFETFNVPAMYVA 137
Score = 110 bits (265), Expect = 4e-25
Identities = 50/60 (83%), Positives = 54/60 (90%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSKR 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA SKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 155 bits (377), Expect = 1e-38
Identities = 67/75 (89%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFN+PAMYVA
Sbjct: 123 QIMFETFNSPAMYVA 137
Score = 106 bits (254), Expect = 9e-24
Identities = 46/60 (76%), Positives = 53/60 (88%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSKR 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA SKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 155 bits (377), Expect = 1e-38
Identities = 67/75 (89%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFN+PAMYVA
Sbjct: 123 QIMFETFNSPAMYVA 137
Score = 106 bits (254), Expect = 9e-24
Identities = 46/60 (76%), Positives = 53/60 (88%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSKR 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA SKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 155 bits (377), Expect = 1e-38
Identities = 67/75 (89%), Positives = 73/75 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFN+PAMYVA
Sbjct: 123 QIMFETFNSPAMYVA 137
Score = 106 bits (254), Expect = 9e-24
Identities = 46/60 (76%), Positives = 53/60 (88%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSKR 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA SKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 155 bits (376), Expect = 1e-38
Identities = 68/75 (90%), Positives = 71/75 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFN PAMYVA
Sbjct: 123 QIMFETFNAPAMYVA 137
Score = 110 bits (265), Expect = 4e-25
Identities = 50/60 (83%), Positives = 54/60 (90%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSKR 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA SKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 155 bits (376), Expect = 1e-38
Identities = 68/75 (90%), Positives = 71/75 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 428 QIMF*TFNTPAMYVA 472
QIMF TFN PAMYVA
Sbjct: 123 QIMFETFNAPAMYVA 137
Score = 110 bits (265), Expect = 4e-25
Identities = 50/60 (83%), Positives = 54/60 (90%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSKR 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA SKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 140 bits (338), Expect = 6e-34
Identities = 58/74 (78%), Positives = 68/74 (91%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ IL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMT
Sbjct: 64 RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMT 123
Query: 428 QIMF*TFNTPAMYV 469
QIMF +F P+MY+
Sbjct: 124 QIMFESFAFPSMYI 137
Score = 102 bits (245), Expect = 1e-22
Identities = 44/60 (73%), Positives = 54/60 (90%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSKR 254
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEA ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 139 bits (336), Expect = 1e-33
Identities = 66/93 (70%), Positives = 73/93 (78%)
Frame = +2
Query: 194 RDGRYGTEGLLCRR*GT*QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 373
RDG E + G + ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 374 VLLTEAPLNPKANREKMTQIMF*TFNTPAMYVA 472
VLLTEAP NPKANREKMTQIMF +F+ PAMYV+
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVS 126
Score = 64.9 bits (151), Expect = 3e-11
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSKR 254
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E H+ R
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANR 53
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 138 bits (334), Expect = 2e-33
Identities = 59/74 (79%), Positives = 68/74 (91%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
+ ILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMT
Sbjct: 18 RSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMT 77
Query: 428 QIMF*TFNTPAMYV 469
QIMF TF P+MY+
Sbjct: 78 QIMFETFAVPSMYI 91
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 91.1 bits (216), Expect = 4e-19
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = +2
Query: 260 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 439
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 440 *TFNTPAMYV 469
+N +++
Sbjct: 126 EKYNFAGVFI 135
Score = 49.6 bits (113), Expect = 1e-06
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAHSKR 254
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELR 63
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 84.2 bits (199), Expect = 4e-17
Identities = 36/69 (52%), Positives = 46/69 (66%)
Frame = +2
Query: 266 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*T 445
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+F T
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 446 FNTPAMYVA 472
FN P +Y+A
Sbjct: 146 FNVPGLYIA 154
Score = 35.9 bits (79), Expect = 0.014
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 87 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 173
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 74.1 bits (174), Expect = 4e-14
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +2
Query: 275 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*TFNT 454
PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK ++MF +
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKV 153
Query: 455 PAMYVA 472
PA+++A
Sbjct: 154 PALFMA 159
Score = 56.8 bits (131), Expect = 7e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 176
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.1 bits (144), Expect = 2e-10
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +2
Query: 275 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 421
P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 5e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 176
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 51.2 bits (117), Expect = 3e-07
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 275 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF*TFN 451
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MF TFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 452 TPAMYVA 472
Y +
Sbjct: 117 VSGFYAS 123
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 87 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 179
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 51.2 bits (117), Expect = 3e-07
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +2
Query: 266 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*T 445
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++F
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 446 FNTPAMYVA 472
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 32.7 bits (71), Expect = 0.13
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 182
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.0 bits (99), Expect = 5e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 236
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
Score = 41.9 bits (94), Expect = 2e-04
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 275 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*TFN 451
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++F T+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 452 TPAM 463
PA+
Sbjct: 145 VPAV 148
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.057
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 211 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 74
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 1.2
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 187 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 101
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 1.2
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -3
Query: 376 DGVFLGGDTQLIVEGMMPNLLHVIPVS 296
DGV +GG + + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 260 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 421
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 260 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 421
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At2g39050.1 68415.m04800 hydroxyproline-rich glycoprotein family
protein contains QXW lectin repeat domain, Pfam:PF00652
Length = 317
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 252 FCYVPHLLHKSPSVPYRPSRPDGGAFPRSRETLREEH 142
F +V H+ H+SP+ Y P G + + +L E H
Sbjct: 88 FGHVSHVGHQSPNESYPPEHHRYGGYQQPSNSLLESH 124
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 187 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 65
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At1g79450.2 68414.m09260 LEM3 (ligand-effect modulator 3) family
protein / CDC50 family protein similar to GI:4966357;
GI:4585976; GI:11994416; GI:9757735 from [Arabidopsis
thaliana]
Length = 283
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 161 KHCARSIISCEAGLAHPGAIVYYQRGNFFVAHLELVK 51
K C R+I +A + HP VYYQ NF+ H VK
Sbjct: 38 KICKRTITVTKA-MKHP-VYVYYQLENFYQNHRRYVK 72
>At1g79450.1 68414.m09259 LEM3 (ligand-effect modulator 3) family
protein / CDC50 family protein similar to GI:4966357;
GI:4585976; GI:11994416; GI:9757735 from [Arabidopsis
thaliana]
Length = 350
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 161 KHCARSIISCEAGLAHPGAIVYYQRGNFFVAHLELVK 51
K C R+I +A + HP VYYQ NF+ H VK
Sbjct: 105 KICKRTITVTKA-MKHP-VYVYYQLENFYQNHRRYVK 139
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,591,473
Number of Sequences: 28952
Number of extensions: 263140
Number of successful extensions: 726
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 811731120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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