Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0183
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    23   3.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   9.4  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   9.4  

>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 167 SAQITLDGIRCGQLICQLDEYCSPE 241
           + +   DGI C Q  C  D+ C+ +
Sbjct: 101 TGRCAFDGICCSQDSCHADKSCASD 125


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 79  TSTVV*YFLNLNFNFKASRGLTGNN 5
           +++VV   LN+N+N  A   L+G N
Sbjct: 445 STSVVGDMLNMNWNPSAQNDLSGVN 469


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 184 QGDLSGGDASEHQDTHESR 128
           +GDL GGD S +     +R
Sbjct: 109 RGDLGGGDTSPNSALQRAR 127


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,201
Number of Sequences: 336
Number of extensions: 3514
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)