Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0182
         (632 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5BHE5 Cluster: Predicted protein; n=1; Emericella nidu...    34   3.3  
UniRef50_Q6XBG9 Cluster: Putative SN-glycerol-3-phosphate-bindin...    33   7.5  
UniRef50_A3HRR3 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  

>UniRef50_Q5BHE5 Cluster: Predicted protein; n=1; Emericella
           nidulans|Rep: Predicted protein - Emericella nidulans
           (Aspergillus nidulans)
          Length = 266

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
 Frame = -1

Query: 248 HTVLRRLLAFTHMRRREYI---*NPFIFNINLKDGVLHNDILSKLYR 117
           HT+  R++ FT++ ++EY+    N F+ N++ K+ +L  + L KL R
Sbjct: 37  HTIASRIIGFTNVLKKEYVPSLMNRFLENVHTKNPILEPNELRKLSR 83


>UniRef50_Q6XBG9 Cluster: Putative SN-glycerol-3-phosphate-binding
           periplasmic protein; n=3; Bacteria|Rep: Putative
           SN-glycerol-3-phosphate-binding periplasmic protein -
           Enterobacter aerogenes (Aerobacter aerogenes)
          Length = 436

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = -3

Query: 327 YGSEFVIAHTNARGGPVVQETHPGKSTYRSPQIIGIYTYAQTGIY 193
           YG     A   A GG    E +PG+  Y SP  IG   + Q  IY
Sbjct: 198 YGGWIFSALVRANGGKYFNEDYPGEVYYNSPTAIGALRFWQDLIY 242


>UniRef50_A3HRR3 Cluster: Putative uncharacterized protein; n=1;
           Algoriphagus sp. PR1|Rep: Putative uncharacterized
           protein - Algoriphagus sp. PR1
          Length = 303

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -1

Query: 164 LKDGVLHNDILSKLYR--LVSLKLHWYKILITYSKFSKRFWITNF*FLSDHK 15
           LKD  +HND +  L+   +V L L+ Y ++  Y KF K+F   N   L D+K
Sbjct: 209 LKDRPIHNDFVYVLFSSGIVGLFLYVYMLVDIYKKFLKKFNKYNSLALVDYK 260


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,923,567
Number of Sequences: 1657284
Number of extensions: 11938256
Number of successful extensions: 24059
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24056
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)