Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0182
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    24   1.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    24   1.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   3.7  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   6.5  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +2

Query: 485 HYHVKTVLRSNIKLYLNY*LSIRTNNMLYNRHLRMLNAKSSVQVLKN 625
           H+ + TVL++  +   N   SIR N+   N+ +     K+ VQ+  N
Sbjct: 180 HFLILTVLKARFEAINNIIDSIRQNSQTRNQAVPTGTIKTLVQMHSN 226


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +2

Query: 485 HYHVKTVLRSNIKLYLNY*LSIRTNNMLYNRHLRMLNAKSSVQVLKN 625
           H+ + TVL++  +   N   SIR N+   N+ +     K+ VQ+  N
Sbjct: 180 HFLILTVLKARFEAINNIIDSIRQNSQTRNQAVPTGTIKTLVQMHSN 226


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 31  N*KLVIQNRFENLLYVIKILYQCNFKDT 114
           N  L ++NRF+ L   +KI   C +  T
Sbjct: 181 NYALALKNRFKELQKYLKIETSCRYVGT 208


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 518 YCFAEQFLRGSVITL 474
           YC  E FLR   ITL
Sbjct: 82  YCCRESFLRERTITL 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,313
Number of Sequences: 336
Number of extensions: 3376
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)