BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0182
(632 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY659929-1|AAT51797.1| 140|Anopheles gambiae lysozyme c-2 protein. 25 2.6
AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein. 24 4.6
AY334000-1|AAR01125.1| 268|Anopheles gambiae FBN23 protein. 24 4.6
AY333998-1|AAR01123.1| 268|Anopheles gambiae FBN23 protein. 24 4.6
AY333997-1|AAR01122.1| 268|Anopheles gambiae FBN23 protein. 24 4.6
AY333999-1|AAR01124.1| 268|Anopheles gambiae FBN23 protein. 23 8.1
>AY659929-1|AAT51797.1| 140|Anopheles gambiae lysozyme c-2 protein.
Length = 140
Score = 24.6 bits (51), Expect = 2.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 116 VYIISIIYHCEGHHPSNLC 172
++ I+ Y C+ H+ SNLC
Sbjct: 72 IFQINNAYWCDSHYGSNLC 90
>AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein.
Length = 897
Score = 23.8 bits (49), Expect = 4.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 329 DTVVSS*SPILMQEGGQLYRKHIPENQHT 243
D +V+ + I + GQ+Y HIP Q T
Sbjct: 325 DALVNGNAEIRTTQQGQVYFYHIPTKQST 353
>AY334000-1|AAR01125.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.8 bits (49), Expect = 4.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 70 VNFQSGFGSLISNFYLIISNLH 5
V +++GFGS+ F+L + LH
Sbjct: 193 VAYRNGFGSVDGEFWLGLERLH 214
>AY333998-1|AAR01123.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.8 bits (49), Expect = 4.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 70 VNFQSGFGSLISNFYLIISNLH 5
V +++GFGS+ F+L + LH
Sbjct: 193 VAYRNGFGSVDGEFWLGLERLH 214
>AY333997-1|AAR01122.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.8 bits (49), Expect = 4.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 70 VNFQSGFGSLISNFYLIISNLH 5
V +++GFGS+ F+L + LH
Sbjct: 193 VAYRNGFGSVDGEFWLGLERLH 214
>AY333999-1|AAR01124.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.0 bits (47), Expect = 8.1
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -2
Query: 70 VNFQSGFGSLISNFYLIISNLH 5
V +++GFGS+ F+L + +H
Sbjct: 193 VAYRNGFGSVDGEFWLGLERIH 214
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,773
Number of Sequences: 2352
Number of extensions: 13154
Number of successful extensions: 32
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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