Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0182
         (632 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   5.7  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   5.7  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   5.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   7.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.9  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.9  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -2

Query: 292 KRGASCTGNTSRKINIPFSADYWH 221
           ++ A  +G   R  N P   D WH
Sbjct: 55  RQAAIQSGEYDRTKNYPLDVDQWH 78


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 185 PFIFNINLKDGVLHNDILSKLY 120
           P +F  N K+G  HN I+  +Y
Sbjct: 118 PDLFFSNEKEGHFHNIIMPNVY 139


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 185 PFIFNINLKDGVLHNDILSKLY 120
           P +F  N K+G  HN I+  +Y
Sbjct: 118 PDLFFSNEKEGHFHNIIMPNVY 139


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 518 YCFAEQFLRGSVITLNIHSNFELL 447
           +C  E  + GS++   +H   ELL
Sbjct: 743 FCITEVMMLGSIVGTPVHMAPELL 766


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 518 YCFAEQFLRGSVITLNIHSNFELL 447
           +C  E  + GS++   +H   ELL
Sbjct: 781 FCITEVMMLGSIVGTPVHMAPELL 804


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -2

Query: 292 KRGASCTGNTSRKINIPFSADYWH 221
           ++ A  +G      N PF  D WH
Sbjct: 54  RQAAIQSGEYDYTKNYPFDVDQWH 77


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -3

Query: 222 IYTYAQTGIYIKSFYL*HKFEGWCPSQ*Y 136
           IY     G+    F+L   F  W PS+ Y
Sbjct: 221 IYFIEDIGLNTYYFFLRQAFPFWLPSKEY 249


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 281 QLYRKHIPENQHTVLRRL 228
           QLY  H+PE   +++  L
Sbjct: 269 QLYYPHVPEYSSSIIMEL 286


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 281 QLYRKHIPENQHTVLRRL 228
           QLY  H+PE   +++  L
Sbjct: 284 QLYYPHVPEYSSSIIMEL 301


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,068
Number of Sequences: 438
Number of extensions: 4050
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)