Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0181
         (730 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    24   1.7  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    24   1.7  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    24   1.7  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    24   1.7  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    23   2.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   2.9  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 484 TFWCEWDSIVIRVHLRI 534
           TFW EW+++  RV + +
Sbjct: 321 TFWLEWNAVPARVMIGV 337


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 484 TFWCEWDSIVIRVHLRI 534
           TFW EW+++  RV + +
Sbjct: 290 TFWLEWNAVPARVMIGV 306


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 484 TFWCEWDSIVIRVHLRI 534
           TFW EW+++  RV + +
Sbjct: 341 TFWLEWNAVPARVMIGV 357


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 484 TFWCEWDSIVIRVHLRI 534
           TFW EW+++  RV + +
Sbjct: 290 TFWLEWNAVPARVMIGV 306


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 624 LQNVFCMSFVF*NWYTRGQVIVGVHRHMMLNSQMY 520
           ++N+F + FV  N    GQVI  V + +   S +Y
Sbjct: 4   MKNIFPVLFVIINVLLHGQVICFVCKDITSTSALY 38


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -1

Query: 178 AIKSATALLELYSGSHFEIGSLLCINLLNFDCFL 77
           A+     LL+L  G+ +E+G +LC + ++ D  L
Sbjct: 89  AVMPPAVLLQLTGGT-WELGPMLCDSWVSLDILL 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,035
Number of Sequences: 438
Number of extensions: 4192
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)