Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0180
(642 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13) 91 9e-19
SB_27978| Best HMM Match : HycH (HMM E-Value=0.12) 59 3e-09
SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30) 59 3e-09
SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_43405| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092) 40 0.001
SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.065
SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13) 33 0.26
SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86) 30 1.8
SB_23957| Best HMM Match : Lectin_C (HMM E-Value=1.2) 29 2.4
SB_6679| Best HMM Match : Keratin_B2 (HMM E-Value=0.0084) 29 2.4
SB_50200| Best HMM Match : RVT_1 (HMM E-Value=0.044) 29 3.2
SB_43329| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_31791| Best HMM Match : PIG-U (HMM E-Value=0.15) 29 3.2
SB_34011| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_22525| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06) 28 5.6
SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42) 28 7.4
SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0) 28 7.4
SB_59531| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 27 9.8
SB_52374| Best HMM Match : GATase_2 (HMM E-Value=0) 27 9.8
SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 27 9.8
SB_47159| Best HMM Match : Peptidase_C42 (HMM E-Value=0.81) 27 9.8
SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_37681| Best HMM Match : SH2 (HMM E-Value=3.5e-11) 27 9.8
SB_22197| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 27 9.8
SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 27 9.8
SB_14793| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
>SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13)
Length = 562
Score = 90.6 bits (215), Expect = 9e-19
Identities = 38/99 (38%), Positives = 57/99 (57%)
Frame = +3
Query: 249 GSKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIE 428
G+ +K+ K P +G+V+++V ACG+ F DL+ RQG PK P++ GFEC+G +E
Sbjct: 49 GNNKIKVEKYARPKPMQGQVVVKVHACGVTFADLLQRQGHFPLAPKPPYVCGFECSGVVE 108
Query: 429 QVGENVTNFKVGDQVVALPEYRAWAELCLYRPSTVYALP 545
++GE VT VG +V+ L Y W E Y +P
Sbjct: 109 ELGEEVTGIDVGARVICLAPYGMWTEYACVDAKMCYVMP 147
>SB_27978| Best HMM Match : HycH (HMM E-Value=0.12)
Length = 316
Score = 59.3 bits (137), Expect = 3e-09
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = +3
Query: 249 GSKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIE 428
G +++ I P P + E EVLIRV LN D + R+G+ PP ILG E +G +E
Sbjct: 37 GPESMYIGDAPRPKLKETEVLIRVHFTALNRADTLQRKGSYPPPPGESEILGLEVSGIVE 96
Query: 429 QVGENVT-NFKVGDQVVALPEYRAWAELCLYRPSTVYALPR 548
++G ++ GD+V+AL +AE + S V +P+
Sbjct: 97 ELGSACNLGWRKGDKVMALVPGGGYAEFAAVQESHVMPIPK 137
>SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30)
Length = 796
Score = 58.8 bits (136), Expect = 3e-09
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Frame = +3
Query: 306 VLIRVKACGLNFQDLIVRQGAIDSPPKT---PFILGFECAGEIEQVGENVTNFKVGDQVV 476
V+++ ACG+N+ D+ +R G +S K P GFE +G I+ GENVT F++G +V
Sbjct: 40 VVVKTFACGVNYADICIRWGLYESAKKFVGWPITPGFEFSGVIQWKGENVTEFEIGQEVF 99
Query: 477 ALPEYRAWAELCLYRPSTVYALPRR 551
+ +++E + ++ALP++
Sbjct: 100 GASLFGSYSECIRVPKNQLFALPKK 124
>SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +3
Query: 261 VKILKKPEPTVGE-GEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVG 437
+ ++ +P P V EV+++V G+ +DL + +G + P +LG E +G + VG
Sbjct: 60 LSVITRPVPHVSNPSEVIVKVAYSGICDRDLQILEGEL--PAAKCVVLGHEFSGVVSDVG 117
Query: 438 ENVTNFKVGDQVVALP 485
+V N +GD+VV P
Sbjct: 118 SDVKNVSIGDRVVVNP 133
>SB_43405| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 303 EVLIRVKACGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVAL 482
+VLI++ A ++ + +R G+ P+ PF G AG I +G+ VT KVGD V L
Sbjct: 289 QVLIKLSAASVSPVETYIRSGSYARLPELPFTPGNYGAGIIHAIGDEVTKHKVGDHVYTL 348
Query: 483 PEYR-AWAELCLYRPSTVYAL 542
++AE + V+ L
Sbjct: 349 STLTGSYAEYTVCEEDNVFLL 369
>SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092)
Length = 676
Score = 40.3 bits (90), Expect = 0.001
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Frame = +3
Query: 222 ARRSTYRLRGSKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFIL 401
+R ST +TV K EP G EVL++ + G+N D+ G K PF
Sbjct: 16 SRLSTNFREAVETVSA-KMLEP--GPEEVLVKTRYAGINATDINHTAGRYKPWNKPPFDA 72
Query: 402 GFECAGEIEQVGENVT-NFKVGDQVVALPEYRAWAELCLYRPSTVYALPRRNVLPWMLLP 578
G E GE+ G++ F VG Q V + +AE + +PR N + ++ LP
Sbjct: 73 GLEGLGEVVATGKDYKGKFSVG-QPVMFMRFGGFAEYVTLTEKDIVPVPRTNPI-FLTLP 130
>SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 348
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +3
Query: 261 VKILKKPEPTV-GEGEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVG 437
+ ++ +P P V +V++++ ++ DL V +G ID ILG + G ++++G
Sbjct: 12 LSVITRPTPHVQSPRDVVVKIAYSAVSGTDLHVLEGRIDCAKS--IILGHQFVGIVKEIG 69
Query: 438 ENVTNFKVGDQVVALP 485
+V + VGD+VV P
Sbjct: 70 ADVQHVSVGDRVVINP 85
>SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 34.7 bits (76), Expect = 0.065
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +3
Query: 303 EVLIRVKACGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFK 458
EV I++ A G+ D G +D P ILG E G +E VGE VT K
Sbjct: 30 EVRIKILATGVCHTDAYTLSG-VDPEGLFPCILGHEGGGIVESVGEGVTKVK 80
>SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13)
Length = 303
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 390 PFILGFECAGEIEQVGENVTNFKVGDQVVALP 485
P +LG E +G I VGE V++ K GD+V P
Sbjct: 52 PMVLGHESSGVICAVGEGVSDLKEGDRVAIEP 83
>SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86)
Length = 1110
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 299 GRGPDSRESLRPKLPRFDSSSGRHRLSTED 388
GRG D +R +LP DSS R S ED
Sbjct: 1055 GRGRDKGRQMRTRLPSIDSSRSMGRSSDED 1084
>SB_23957| Best HMM Match : Lectin_C (HMM E-Value=1.2)
Length = 120
Score = 29.5 bits (63), Expect = 2.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 514 CTGPVPCTRCPEGMSCPGC 570
C GP CP G++CP C
Sbjct: 30 CYGPASYRICPHGLACPNC 48
>SB_6679| Best HMM Match : Keratin_B2 (HMM E-Value=0.0084)
Length = 292
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 516 YRPSTVYALPRRNVLPWMLLPSPRTTWWPIC 608
YR S V PRR+ + PSPR ++W C
Sbjct: 89 YRVSCVQPSPRRSYRVSCVQPSPRRSYWDSC 119
>SB_50200| Best HMM Match : RVT_1 (HMM E-Value=0.044)
Length = 527
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +3
Query: 285 PTVGEGEVLIRVKACGLN 338
P V EG V++++KACGL+
Sbjct: 316 PQVDEGSVVVKIKACGLD 333
>SB_43329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 282
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 385 FGGESMAP*RTIKSWKFRPQAFTRIRTSPSPT 290
FG + +P TIKSW ++PQ TR +P T
Sbjct: 74 FGIDGTSP-PTIKSWCYKPQTVTRSSKTPVKT 104
>SB_31791| Best HMM Match : PIG-U (HMM E-Value=0.15)
Length = 1366
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 526 VPCTRCPEGMSCPGCCCHHHELRGGLSAALRDGLTWTS 639
+PC CP G SC H+ G + DGL +T+
Sbjct: 809 IPCLPCPFGASCSYNIKSEHDFWGYVVCNKTDGLNFTN 846
>SB_34011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = +1
Query: 412 ALVKSSKLAKMSPILRWATKWWLSPSTALGPSCVCTGPVPCT 537
++ + S+L + + + +W++P ++L P C P+ CT
Sbjct: 283 SVTRGSELGRWIMAFKRRSNYWITPISSLLPLMKCPSPLGCT 324
>SB_22525| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 674
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +1
Query: 370 STLHRRLLSSWASNALVKSSKLAKMSPILRWATKWWLSP 486
S L +LL W + K ++ P RW WWL P
Sbjct: 240 SILGGKLLGIWIDLNVPKGVRITPFDP--RWMGAWWLGP 276
>SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06)
Length = 998
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 358 VRAPSTLHRRLLSSWASNALVKSSKLAKMSPILRWATKWWLSPSTALGP 504
+ +PS L+ S A L+K+ + ++SP+ + K + SP T P
Sbjct: 269 ILSPSPLNSGRSSIRAELTLIKTENMVQLSPLTSPSAKGYASPQTTTRP 317
>SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42)
Length = 1712
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 532 CTRCPEGMSCPGCC 573
C+RCP C GCC
Sbjct: 938 CSRCPPAKYCTGCC 951
>SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 587
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 481 SPSTALGPSCVCTGPVPCTRCPEGMSCPGCCCH 579
SP ++ P C TG CTR G C C +
Sbjct: 390 SPVGSVSPDCDVTGHCTCTRGFGGRKCDRCASY 422
>SB_59531| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 323
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 478 ATTWSPTLKLVTFSPTCSISPAHSKPKMKGV 386
A TWSPTL +T +P S+S + ++G+
Sbjct: 53 AATWSPTLATLTANPPKSLSKSCGVVNIQGL 83
>SB_52374| Best HMM Match : GATase_2 (HMM E-Value=0)
Length = 1075
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 478 ATTWSPTLKLVTFSPTCSISPAHSKPKMKGV 386
A TWSPTL +T +P S+S + ++G+
Sbjct: 166 AATWSPTLATLTANPPKSLSKSCGVVNIQGL 196
>SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 998
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 478 ATTWSPTLKLVTFSPTCSISPAHSKPKMKGV 386
A TWSPTL +T +P S+S + ++G+
Sbjct: 258 AATWSPTLATLTANPPKSLSKSCGVVNIQGL 288
>SB_47159| Best HMM Match : Peptidase_C42 (HMM E-Value=0.81)
Length = 367
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -3
Query: 640 GKSKLSHLEEQQIGHHVVRGDGNSIQGKTFLRGSAYTVLGR--YRHSSAQARYSGRAT 473
GKS L H+ + G +R ++ GK+ LR + G+ RH + QA Y G++T
Sbjct: 16 GKSTLRHVTQAMYGKSTLRHMTQAMDGKSTLRHVTQAMYGKSTLRHMT-QAMY-GKST 71
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -3
Query: 640 GKSKLSHLEEQQIGHHVVRGDGNSIQGKTFLRGSAYTVLGR--YRHSSAQARYSGRAT 473
GKS L H+ + G +R ++ GK+ LR + G+ RH + QA Y G++T
Sbjct: 159 GKSTLRHVTQAMYGKSTLRHVTQAMYGKSTLRHMTQAMYGKSTLRHMT-QAMY-GKST 214
>SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 478 ATTWSPTLKLVTFSPTCSISPAHSKPKMKGV 386
A TWSPTL +T +P S+S + ++G+
Sbjct: 442 AATWSPTLATLTANPPKSLSKSCGVVNIQGL 472
>SB_37681| Best HMM Match : SH2 (HMM E-Value=3.5e-11)
Length = 421
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 480 LPEYRAWAELCLY-RPSTVYALPRRNVLP 563
L ++ + AE C+Y P + ALPR+N LP
Sbjct: 332 LLQHYSQAEQCMYYEPLLLNALPRKNTLP 360
>SB_22197| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 528
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 478 ATTWSPTLKLVTFSPTCSISPAHSKPKMKGV 386
A TWSPTL +T +P S+S + ++G+
Sbjct: 258 AATWSPTLATLTANPPRSLSKSCGVVNIQGL 288
>SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 870
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 478 ATTWSPTLKLVTFSPTCSISPAHSKPKMKGV 386
A TWSPTL +T +P S+S + ++G+
Sbjct: 258 AATWSPTLATLTANPPRSLSKSCGVVNIQGL 288
>SB_14793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 821
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 478 ATTWSPTLKLVTFSPTCSISPAHSKPKMKGV 386
A TWSPTL +T +P S+S + ++G+
Sbjct: 542 AATWSPTLATLTANPPKSLSKSCGVVNIQGL 572
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,311,821
Number of Sequences: 59808
Number of extensions: 415771
Number of successful extensions: 1302
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1294
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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