Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0180
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    27   0.38 
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   2.7  
EF989011-1|ABS17666.1|  399|Anopheles gambiae serpin 7 protein.        23   6.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   6.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   8.2  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 22/88 (25%), Positives = 35/88 (39%)
 Frame = +3

Query: 183 RGEKG*DPTAQGNARRSTYRLRGSKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQ 362
           R   G  P   GN+  S  +++  K  ++   P PT  E  +     + G+NF      Q
Sbjct: 102 RNGDGGRPAYSGNSDPSMDQVKTDKPRELYIPPLPTEDESLIFGSGISSGINFDKFEEIQ 161

Query: 363 GAIDSPPKTPFILGFECAGEIEQVGENV 446
             +        +  FE +G  E+V  NV
Sbjct: 162 VRVSGENPPDHVESFERSGLREEVMTNV 189


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = -2

Query: 572 QHPGQDIPSGQRVHGTGPVQTQLGPSAVLGESHHLVAHLK 453
           Q P        R+ G+ P      P    GES+H   H++
Sbjct: 283 QQPSVIFSPVPRLAGSSPAAAPPSPPTSAGESNHYYGHIR 322


>EF989011-1|ABS17666.1|  399|Anopheles gambiae serpin 7 protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 554 IPSGQRVHGTGPVQTQLGPSAVLGESHHLVAHLK 453
           +  GQ   G+G + T  GP    G++   V + K
Sbjct: 22  VAEGQGTTGSGTIGTNGGPDLSFGDADFSVQYFK 55


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -1

Query: 546 GAARTRYWAGTDTARPKRGTRGEP-PLG 466
           GA   R + G++    ++GT+GEP P+G
Sbjct: 115 GAKGVRGFPGSEGLPGEKGTKGEPGPVG 142


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 566 PGQDIPSGQRVHGTGPVQTQ 507
           P Q  P G  V G GP+ +Q
Sbjct: 231 PHQQHPPGAGVQGAGPIPSQ 250


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,581
Number of Sequences: 2352
Number of extensions: 14011
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)