Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0178
(677 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD... 123 3e-28
AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA... 123 3e-28
AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p pro... 107 1e-23
AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB... 107 1e-23
X69677-1|CAB41492.1| 197|Drosophila melanogaster ribosomal prot... 72 8e-13
AY113393-1|AAM29398.1| 891|Drosophila melanogaster RE07247p pro... 30 2.5
AE014296-2707|AAF49484.2| 891|Drosophila melanogaster CG4998-PA... 30 2.5
AE014296-2706|ABI31256.1| 1185|Drosophila melanogaster CG4998-PB... 30 2.5
AE014298-3060|AAF50875.1| 223|Drosophila melanogaster CG11229-P... 29 5.8
AE014296-1104|AAF50670.1| 1320|Drosophila melanogaster CG10226-P... 29 7.7
>AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD,
isoform D protein.
Length = 195
Score = 123 bits (296), Expect = 3e-28
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = -2
Query: 256 ESIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRK 77
+SIHHAR+LIRQRHIRVRKQVVNIPSF+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL+K
Sbjct: 122 KSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLKK 181
Query: 76 GQ 71
Q
Sbjct: 182 NQ 183
Score = 107 bits (257), Expect = 1e-23
Identities = 52/58 (89%), Positives = 55/58 (94%)
Frame = -3
Query: 429 LEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLA 256
L+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GLA
Sbjct: 64 LDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLA 121
>AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA,
isoform A protein.
Length = 195
Score = 123 bits (296), Expect = 3e-28
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = -2
Query: 256 ESIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRK 77
+SIHHAR+LIRQRHIRVRKQVVNIPSF+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL+K
Sbjct: 122 KSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLKK 181
Query: 76 GQ 71
Q
Sbjct: 182 NQ 183
Score = 107 bits (257), Expect = 1e-23
Identities = 52/58 (89%), Positives = 55/58 (94%)
Frame = -3
Query: 429 LEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLA 256
L+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GLA
Sbjct: 64 LDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLA 121
>AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p
protein.
Length = 137
Score = 107 bits (257), Expect = 1e-23
Identities = 52/58 (89%), Positives = 55/58 (94%)
Frame = -3
Query: 429 LEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLA 256
L+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GLA
Sbjct: 64 LDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLA 121
Score = 35.1 bits (77), Expect = 0.089
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = -2
Query: 256 ESIHHARILIRQRHIR 209
+SIHHAR+LIRQRHIR
Sbjct: 122 KSIHHARVLIRQRHIR 137
>AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB,
isoform B protein.
Length = 137
Score = 107 bits (257), Expect = 1e-23
Identities = 52/58 (89%), Positives = 55/58 (94%)
Frame = -3
Query: 429 LEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLA 256
L+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GLA
Sbjct: 64 LDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLA 121
Score = 35.1 bits (77), Expect = 0.089
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = -2
Query: 256 ESIHHARILIRQRHIR 209
+SIHHAR+LIRQRHIR
Sbjct: 122 KSIHHARVLIRQRHIR 137
>X69677-1|CAB41492.1| 197|Drosophila melanogaster ribosomal protein
protein.
Length = 197
Score = 71.7 bits (168), Expect = 8e-13
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = -2
Query: 340 ETRLCAWSED*GLLGASSADAGVQSWPGESIHHARILIRQRHIRVRKQVVNIPSFIVRLD 161
E RL A SED GLLGASSADAGVQ+ +SIHHAR+LIRQR + + IPSF+V
Sbjct: 92 EARLRAGSEDSGLLGASSADAGVQAGLAKSIHHARVLIRQRTFVLASRWSTIPSFVVTPG 151
Query: 160 SGKHI-DFSLKSPFGGGRPGRVKRK 89
+ +FSLK P RP R +++
Sbjct: 152 LPEATSNFSLKMPL-RTRPSRSRQE 175
Score = 42.7 bits (96), Expect = 4e-04
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = -3
Query: 429 LEEKDPKRLFEGNALLRRLVRIGVL 355
L+EKD KRLF+G +L+RRLVRIGVL
Sbjct: 63 LDEKDAKRLFQGKSLVRRLVRIGVL 87
>AY113393-1|AAM29398.1| 891|Drosophila melanogaster RE07247p
protein.
Length = 891
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 220 FAGSKFWHDGWTRQASFEHLRLQTTLQEV 306
F G++ W GW + A EH + Q L+EV
Sbjct: 767 FTGARCWTTGWGKDAFGEHGKYQNILKEV 795
>AE014296-2707|AAF49484.2| 891|Drosophila melanogaster CG4998-PA,
isoform A protein.
Length = 891
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 220 FAGSKFWHDGWTRQASFEHLRLQTTLQEV 306
F G++ W GW + A EH + Q L+EV
Sbjct: 767 FTGARCWTTGWGKDAFGEHGKYQNILKEV 795
>AE014296-2706|ABI31256.1| 1185|Drosophila melanogaster CG4998-PB,
isoform B protein.
Length = 1185
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 220 FAGSKFWHDGWTRQASFEHLRLQTTLQEV 306
F G++ W GW + A EH + Q L+EV
Sbjct: 1061 FTGARCWTTGWGKDAFGEHGKYQNILKEV 1089
>AE014298-3060|AAF50875.1| 223|Drosophila melanogaster CG11229-PA
protein.
Length = 223
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -1
Query: 542 ARRLSWVTPGFSSHD-VVKRRPVNCNTTHYRANWVPGPPS 426
A R SW SH ++ VN + T R+ W PGPP+
Sbjct: 170 AGRCSWSPSALWSHILIIFSIVVNASATASRSFWFPGPPA 209
>AE014296-1104|AAF50670.1| 1320|Drosophila melanogaster CG10226-PA
protein.
Length = 1320
Score = 28.7 bits (61), Expect = 7.7
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -2
Query: 259 GESIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS-PFGGGRPGRV 98
GE+I H + Q+ + + N FI+ L G D S K GG+ R+
Sbjct: 507 GENIRHGKPEATQKEVEDAAKAANAHDFIIALHKGYDTDISEKGVQLSGGQRQRI 561
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,856,355
Number of Sequences: 53049
Number of extensions: 763600
Number of successful extensions: 2183
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2183
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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