Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0177
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    28   0.30 
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    26   0.91 
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    26   0.91 
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    25   2.1  
AF043438-1|AAC05663.1|  231|Anopheles gambiae putative pupal-spe...    25   2.1  
AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific cut...    25   2.1  
AF043442-1|AAC05667.1|  231|Anopheles gambiae putative pupal-spe...    25   2.8  
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    25   2.8  
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    25   2.8  
AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    25   2.8  
AF043433-3|AAC05658.1|  231|Anopheles gambiae putative pupal-spe...    25   2.8  
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    25   2.8  
AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    24   4.9  

>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 0.30
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = -2

Query: 649 LSESVGESVSIPKT-VAGVADQRSDLGGMGLGQRLGDHRLAGGEGGSVAAC 500
           LS S+     IP+  + G     SD  GMG       HRL+  +GGS   C
Sbjct: 101 LSLSLSLVDMIPEEKLRGRHSSESDREGMGHDSHKRTHRLSDSDGGSTEGC 151


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = +1

Query: 91  YSHGLVAHGVVA-HGLAPAAPTISPGDLHGATIDAHVEASDH 213
           Y+H  VAH  V  H  AP A   +P   H A I  H     H
Sbjct: 174 YAHAPVAHATVQHHHAAPIAHYAAPIAHHAAPIAHHAAPIAH 215


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = +1

Query: 91  YSHGLVAHGVVA-HGLAPAAPTISPGDLHGATIDAHVEASDH 213
           Y+H  VAH  V  H  AP A   +P   H A I  H     H
Sbjct: 174 YAHAPVAHATVQHHHAAPIAHYAAPIAHHAAPIAHHAAPIAH 215


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 91  YSHGLVAHGVVA-HGLAPAAPTISPGDLHGATIDAHVEA 204
           Y+H  VAH  V  H  AP A   +P   H A I AH  A
Sbjct: 166 YAHAPVAHATVQHHHAAPIAHYAAPIAHHAAPI-AHYAA 203


>AF043438-1|AAC05663.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 91  YSHGLVAHGVVA-HGLAPAAPTISPGDLHGATIDAHVEA 204
           Y+H  VAH  V  H  AP A   +P   H A I AH  A
Sbjct: 166 YAHAPVAHATVQHHHAAPIAHYAAPIAHHAAPI-AHYAA 203


>AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific
           cuticular protein CP2b protein.
          Length = 231

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 91  YSHGLVAHGVVA-HGLAPAAPTISPGDLHGATIDAHVEA 204
           Y+H  VAH  V  H  AP A   +P   H A I AH  A
Sbjct: 166 YAHAPVAHATVQHHHAAPIAHYAAPIAHHAAPI-AHYAA 203


>AF043442-1|AAC05667.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 231

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 91  YSHGLVAHGVVA-HGLAPAAPTISPGDLHGATIDAHVEA 204
           Y+H  VAH  V  H  AP A   +P   H A I AH  A
Sbjct: 166 YAHAPVAHATVQHHHAAPIAHYSAPIAHHAAPI-AHYAA 203


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 91  YSHGLVAHGVVA-HGLAPAAPTISPGDLHGATIDAHVEA 204
           Y+H  VAH  V  H  AP A   +P   H A I AH  A
Sbjct: 174 YAHAPVAHATVQHHHAAPIAHYSAPIAHHAAPI-AHYAA 211


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 91  YSHGLVAHGVVA-HGLAPAAPTISPGDLHGATIDAHVEA 204
           Y+H  VAH  V  H  AP A   +P   H A I AH  A
Sbjct: 174 YAHAPVAHATVQHHHAAPIAHYSAPIAHHAAPI-AHYAA 211


>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 91  YSHGLVAHGVVA-HGLAPAAPTISPGDLHGATIDAHVEA 204
           Y+H  VAH  V  H  AP A   +P   H A I AH  A
Sbjct: 198 YAHAPVAHATVQHHHAAPIAHYSAPIAHHAAPI-AHYAA 235


>AF043433-3|AAC05658.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 91  YSHGLVAHGVVA-HGLAPAAPTISPGDLHGATIDAHVEA 204
           Y+H  VAH  V  H  AP A   +P   H A I AH  A
Sbjct: 166 YAHAPVAHATVQHHHAAPIAHYSAPIAHHAAPI-AHYAA 203


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 91  YSHGLVAHGVVA-HGLAPAAPTISPGDLHGATIDAHVEA 204
           Y+H  VAH  V  H  AP A   +P   H A I AH  A
Sbjct: 174 YAHAPVAHATVQHHHAAPIAHYSAPIAHHAAPI-AHYAA 211


>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = +1

Query: 91  YSHGLVAHGVVA-HGLAPAAPTISPGDLHGATIDAHVEASDH 213
           Y+H  VAH  V  H  AP A   +P   H A I  +     H
Sbjct: 166 YAHAPVAHATVQHHHAAPIAHYSAPIAHHAAPITHYAAPIAH 207


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 370,462
Number of Sequences: 2352
Number of extensions: 5185
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)