Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0176
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.6  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   2.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.7  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/52 (23%), Positives = 22/52 (42%)
 Frame = -3

Query: 278 FQMCLVLFRHSV*LRFILYFCQFYYFFKIL*HAFDIFF*SCSVRFKKCFFIL 123
           F +C   F ++    FI+  C +Y+++  +     + F  C   F    F L
Sbjct: 96  FLLCTYYFYYA----FIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFL 143


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 435 SHSCCFVRNNFEFW 394
           SH C FV +N  FW
Sbjct: 113 SHYCLFVASNCFFW 126


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 435 SHSCCFVRNNFEFW 394
           SH C FV +N  FW
Sbjct: 113 SHYCLFVASNCFFW 126


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 405  FEFWVMASLTDGKSLRIKYCLISDTSFI 322
            +EFWV A+ T G+    K   +S ++ +
Sbjct: 1278 YEFWVTAATTIGEGQPSKKVTVSPSASV 1305


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 257 FRHSV*LRFILYFCQFYY 204
           F H   L FI  +CQF Y
Sbjct: 129 FWHRYTLSFIENYCQFLY 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,505
Number of Sequences: 336
Number of extensions: 2328
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)