Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0176
         (631 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1025 - 23737339-23737572,23739027-23739092,23739184-23739330     53   2e-07
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42...    29   3.0  
05_07_0063 - 27428056-27428184,27428321-27428460,27428698-274289...    28   7.0  
10_08_0928 + 21617977-21618157,21618260-21618378,21618653-216187...    27   9.3  

>08_02_1025 - 23737339-23737572,23739027-23739092,23739184-23739330
          Length = 148

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 23/84 (27%), Positives = 50/84 (59%)
 Frame = +2

Query: 263 QDTFEMQVRAANIVRAGESLMKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQQECDQK 442
           Q+ F+M +R + +V + +SL+KLVS++K+  I +   S+ E + +  ++F  + +  ++ 
Sbjct: 59  QEAFQMDMRGSRMVHSADSLLKLVSELKRTAIFSGLASLTENVDRRIEIFSQQVEGTERM 118

Query: 443 LMSLRDDIAADLYDLEDEYFTSFI 514
           L  +  + A  L +LE  Y++S +
Sbjct: 119 LERIGQEAAGSLKELEAHYYSSVV 142


>03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-420209,
            420334-420502,421115-424273,424367-424485,424915-425116
          Length = 1363

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
 Frame = +2

Query: 242  KQNDEIEQDTFEMQVRAANIVRAGESLMKLVSDIKQYLI-LNDFPSVNEAITQNSKL-FR 415
            ++N E+ +    ++ +   +    ES    + D K  ++ L D     +A  +  +L F+
Sbjct: 778  QENIELSERISGLEAQLTYMTNEKESSELQIHDSKSLIVNLKDKVERQQAEMETQRLEFK 837

Query: 416  TKQQECDQKLMSLRDD 463
             KQQE  +KL   +DD
Sbjct: 838  QKQQEAQRKLSEAQDD 853


>05_07_0063 -
           27428056-27428184,27428321-27428460,27428698-27428926,
           27429231-27429281,27429411-27429636,27430230-27430300,
           27430466-27430585,27430671-27430865,27431088-27431152,
           27431232-27431322,27431607-27431707,27431767-27431817,
           27432076-27432177,27432406-27432510,27432600-27432663,
           27433023-27433151
          Length = 622

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 132 EALLKSYTTRLKEDVKSMLENFEEIIKLAKVENESQLNRMTK 257
           E L KS +  L+  +KS +   + +I     E E++LNR+ K
Sbjct: 293 EHLAKSLSKHLETVIKSRIPGLQSLITKTIAELETELNRLGK 334


>10_08_0928 +
           21617977-21618157,21618260-21618378,21618653-21618774,
           21618853-21619049,21619350-21619603,21619779-21619880,
           21619976-21620404,21620611-21621369,21621586-21621771
          Length = 782

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +3

Query: 84  SNKEQTNMQRSLPQNKEALLKSYTTRLKEDVKSMLENFEEIIKLAKVEN 230
           ++KE   MQR L +  E    SY+T   ED++S   +F E +K+    N
Sbjct: 389 TSKEADKMQR-LEKLLELDGMSYSTFTWEDIESATSSFSEALKIGSGSN 436


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,967,181
Number of Sequences: 37544
Number of extensions: 185855
Number of successful extensions: 491
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)