Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0175
(638 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 23 3.3
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 4.4
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 4.4
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 7.6
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 7.6
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 7.6
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 7.6
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 7.6
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 7.6
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 7.6
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 7.6
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 7.6
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 7.6
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 7.6
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 7.6
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 7.6
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 7.6
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 7.6
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 7.6
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 7.6
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 7.6
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 7.6
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 22.6 bits (46), Expect = 3.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 175 NVCRQILKSLNMCRN 219
N+C+++ SLN RN
Sbjct: 36 NICKRVYSSLNSLRN 50
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 4.4
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK +K YR+Y +S+
Sbjct: 49 SYKNEKEYRKYRERSK 64
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 4.4
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK +K YR+Y +S+
Sbjct: 49 SYKNEKEYRKYRERSK 64
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 49 SYKNEREYREYRETSR 64
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 49 SYKNEREYREYRETSR 64
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 49 SYKNEREYREYRETSR 64
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 49 SYKNEREYREYRETSR 64
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 49 SYKNEREYREYRETSR 64
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 49 SYKNEREYREYRETSR 64
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 49 SYKNEREYREYRETSR 64
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 49 SYKNEREYREYRETSR 64
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 49 SYKNEREYREYRETSR 64
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 49 SYKNEREYREYRETSR 64
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 49 SYKNEREYREYRETSR 64
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 298 SYKNEREYREYRETSR 313
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 298 SYKNEREYREYRETSR 313
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 298 SYKNEREYREYRETSR 313
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 298 SYKNEREYREYRETSR 313
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 298 SYKNEREYREYRETSR 313
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 298 SYKNEREYREYRETSR 313
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 297 SYKNEREYREYRETSR 312
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 TYKTKKHYRQYPNKSR 627
+YK ++ YR+Y SR
Sbjct: 298 SYKNEREYREYRETSR 313
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,105
Number of Sequences: 438
Number of extensions: 3433
Number of successful extensions: 40
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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