Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0174
(542 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 64 2e-11
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 62 5e-11
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 59 5e-10
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 37 0.002
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 36 0.003
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 36 0.004
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 33 0.027
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 29 0.34
SPAC2F7.17 |||peptide chain release factor|Schizosaccharomyces p... 28 1.0
SPCC126.08c |||lectin |Schizosaccharomyces pombe|chr 3|||Manual 26 3.1
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 26 3.1
SPCC777.13 |vps35||retromer complex subunit Vps35|Schizosaccharo... 26 4.1
SPBC1711.10c |npl4||Cdc48-Ufd1-Npl4 complex component Npl4 |Schi... 25 5.5
SPBC839.07 |ibp1||itty bitty phosphatase Ibp1|Schizosaccharomyce... 25 5.5
SPBP8B7.12c |fta3|sma3|Sim4 and Mal2 associated |Schizosaccharom... 25 7.2
SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 25 7.2
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 25 7.2
SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo... 25 7.2
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 25 9.5
SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 9.5
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 25 9.5
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 63.7 bits (148), Expect = 2e-11
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = +3
Query: 252 TWCGHCKSLVPEYKKAARALK--GIVKVGALDADEHRSVSQKYGVTGFPTIKIF--TGSK 419
TWCGHCKSL P Y++ + V +G +DAD H V+ KY +TGFPT+ F GS+
Sbjct: 49 TWCGHCKSLAPVYEELGALFEDHNDVLIGKIDADTHSDVADKYHITGFPTLIWFPPDGSE 108
Query: 420 HTPYQGQRTAEGFVE 464
Y R + +
Sbjct: 109 PVQYSNARDVDSLTQ 123
Score = 51.2 bits (117), Expect = 1e-07
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALKG--IVKVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKHT 425
WCG+CK L P Y+ + K V++ ++AD + + + V FPTIK F K
Sbjct: 169 WCGYCKRLAPTYETLGKVFKNEPNVEIVKINADVFADIGRLHEVASFPTIKFFPKDDKDK 228
Query: 426 P--YQGQRTAEGFVE 464
P Y+G R+ E +E
Sbjct: 229 PELYEGDRSLESLIE 243
Score = 31.5 bits (68), Expect = 0.083
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 169 SDVIELTPSNFDKLLTNSDEIWIIEFFAPGVDIVKALFPNIKKL 300
S+V+EL NFDK++ + + ++EF+A K L P + L
Sbjct: 140 SNVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETL 183
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 62.1 bits (144), Expect = 5e-11
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALKGIVKVGAL--DADEHRSVSQKYGVTGFPTIK-IFTGSK-- 419
WCG+CK LVP Y+K A L ++ V A+ DAD++R+V +Y V GFPTIK ++ SK
Sbjct: 59 WCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGS 118
Query: 420 ---HTPYQGQRT 446
T Y G R+
Sbjct: 119 SLSSTDYNGDRS 130
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 58.8 bits (136), Expect = 5e-10
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARAL-KGIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKHTP 428
WCGHCK+L PEY+ AA L K + + +D E + +Y + G+PT+ +F G + +
Sbjct: 50 WCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIRGYPTLNVFKNGKQISQ 109
Query: 429 YQGQRTAEGFVE 464
Y G R + V+
Sbjct: 110 YSGPRKHDALVK 121
Score = 35.5 bits (78), Expect = 0.005
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 160 DSSSDVIELTPSNFDKLLTNSDEIWIIEFFAPGVDIVKALFPNIKKLPE 306
+S D++ L NFD ++ + + ++EF+AP K L P +KL E
Sbjct: 352 ESQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAE 400
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/41 (29%), Positives = 27/41 (65%)
Frame = +1
Query: 163 SSSDVIELTPSNFDKLLTNSDEIWIIEFFAPGVDIVKALFP 285
+S++V ++ ++L+T +D++ +++F+AP KAL P
Sbjct: 20 ASAEVPKVNKEGLNELIT-ADKVLMVKFYAPWCGHCKALAP 59
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 407
WCG CK L P +K + + + A++AD+ ++QK GV PT+ +F
Sbjct: 46 WCGPCKYLKPFLEKLSEQNQKASFI-AVNADKFSDIAQKNGVYALPTMVLF 95
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 36.3 bits (80), Expect = 0.003
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALKGIVKVGA-LDADEHRSVSQKYGVTGFPTIKIFTGSK 419
WCG CK++ P + + A V A ++ DE R ++ GV PT F K
Sbjct: 30 WCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFENGK 85
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 35.9 bits (79), Expect = 0.004
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 252 TWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKHTP 428
TWCG CK++ P++++ + + +D D+ ++ + GV P+ ++ G K
Sbjct: 28 TWCGPCKAIAPKFEQFSNTYSDATFI-KVDVDQLSEIAAEAGVHAMPSFFLYKNGEKIEE 86
Query: 429 YQGQRTAEGFVEAALNA 479
G A+ +EA++ A
Sbjct: 87 IVGANPAK--LEASIKA 101
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 33.1 bits (72), Expect = 0.027
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1
Query: 139 TGSLALYDSSSDVIELTPSNFDKLLTNSDEIWIIEFF 249
TGS + SDV+ L+ S LL SD WII FF
Sbjct: 428 TGSPLAHVLCSDVVNLSVSTVFNLLCGSDTTWIINFF 464
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 29.5 bits (63), Expect = 0.34
Identities = 13/60 (21%), Positives = 24/60 (40%)
Frame = +3
Query: 258 CGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHTPYQG 437
C C + R +K+ ++ DE + + + + FPT ++F G Y G
Sbjct: 209 CEDCFHWEAVWSSITRNTDERLKMAQVNCDEEKEMCNHFHIKKFPTFRVFQGFDSIQYNG 268
>SPAC2F7.17 |||peptide chain release factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 396
Score = 27.9 bits (59), Expect = 1.0
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 465 AALNAAKEKAYENLGKKSSGYSSDK 539
AALNAAKE E L +K+ SSD+
Sbjct: 314 AALNAAKENEAERLKRKNQVTSSDR 338
>SPCC126.08c |||lectin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 312
Score = 26.2 bits (55), Expect = 3.1
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 381 TGFPTIKIFTGSKHTPYQGQRTAEGFVEAALNAAKEKAYE-NLGK 512
T FP + + G HTPY + + A+ +A + + NLGK
Sbjct: 142 TLFPRVIVMKGDGHTPYDYENDGKANEIASCSALNVRGNDYNLGK 186
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 26.2 bits (55), Expect = 3.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 106 HGYSIGILLCATGSLALYDSSSDVIELTPSNFDKLLTNSD 225
HG ++G L T + +SSD E + SN D+ L +S+
Sbjct: 9 HGQALGSTLNHTTEVTRISNSSDHFEDSSSNVDESLDSSN 48
>SPCC777.13 |vps35||retromer complex subunit
Vps35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 785
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 102 VTRIFNRYLALCNGVLGPLRFVFRRY 179
V I N L +C GV PLR +F R+
Sbjct: 75 VREIMNDLLDMCRGVQHPLRGLFLRH 100
>SPBC1711.10c |npl4||Cdc48-Ufd1-Npl4 complex component Npl4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 545
Score = 25.4 bits (53), Expect = 5.5
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -1
Query: 395 CGEASDSIFL*YTSMFISI*-GTYFYNAL*SSGSFFIFGNKAFTMSTPGAKNSMIQISSE 219
C SDS FL ++ S T F N S S + FG+K T G N I++ S
Sbjct: 343 CKRHSDSYFLSSLEVYNSANFQTKFKNPCKWSRSGY-FGSKFVTSVISGNLNGEIEVMSY 401
Query: 218 FVSNLSKLL 192
VSN+ L
Sbjct: 402 QVSNIGTAL 410
>SPBC839.07 |ibp1||itty bitty phosphatase Ibp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 138
Score = 25.4 bits (53), Expect = 5.5
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 264 HCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGV-TGFPTIKIFTG 413
HC KAAR L I++ ++ E S+SQK + PT+ I G
Sbjct: 69 HCTYSQVRGPKAARVLSEILRNRITESKEKLSLSQKEKLFQNLPTVYILHG 119
>SPBP8B7.12c |fta3|sma3|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 220
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 372 YGVTGFPTIKIFTGSKHTPYQGQRTAEGFVEAALNAAKEKAYENLGKKSS-GYSSDKV 542
+ + F T G + + + GF+ + LN + + ENL +SS ++S+++
Sbjct: 72 FSILNFMTTNSLVGQLYQRLYDESNSLGFISSPLNETEHLSEENLKIESSITFTSEEI 129
>SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 25.0 bits (52), Expect = 7.2
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 103 LHGYSIGILLCATGSLALYDSSSDVIELTPSNFDKLLTNSDEIWIIEFFAPGVD 264
LH + +LL LAL DS+S I++ + F TN F+ GVD
Sbjct: 4 LHFLTTSLLLLGGSRLALADSASSAIKIKGNAFFNSDTNE------RFYVRGVD 51
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 25.0 bits (52), Expect = 7.2
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 331 VP*MLMNIEVYHRNMESLASPQLRYSQ 411
VP +L+N+E +H+ ++ A+P + +Q
Sbjct: 134 VPPLLLNVESHHKVLDMCAAPGSKTAQ 160
>SPCC1682.03c |mug174||meiotically upregulated gene
Mug174|Schizosaccharomyces pombe|chr 3|||Manual
Length = 626
Score = 25.0 bits (52), Expect = 7.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 263 STPGAKNSMIQISSEFVSNLSKLLGVSSITSEDES 159
STP +S SS VS+ S L S +S DES
Sbjct: 260 STPSESDSSSSESSSSVSDSSDLSSTSDSSSGDES 294
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 24.6 bits (51), Expect = 9.5
Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 10/102 (9%)
Frame = +3
Query: 90 KFHNVTRIFNRYLA--LCNGVLGPLRFVFR--------RYRADTE*FRQITYKFRRNLDH 239
KF +++ F +LA LC GV VF +Y + ++ FRR H
Sbjct: 234 KFFTLSQSFKLHLADALCLGVSANGDMVFSSGIDRKTIQYSREGGKREWVSNSFRRFHSH 293
Query: 240 *VLCTWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVS 365
V C CKSL + ++ V + HR +S
Sbjct: 294 DVRCMAVFECKSLDVLISGGMDMMLAVIPVRQFNRKNHRMIS 335
>SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 684
Score = 24.6 bits (51), Expect = 9.5
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1
Query: 233 QISSEFVSNLSKLLGVSSITSEDES*RAKDPVAQSK 126
Q SS +N SKL +SS SEDE +D A +
Sbjct: 638 QSSSNSRANPSKLFNISSDDSEDEVPIIEDTTASDE 673
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 24.6 bits (51), Expect = 9.5
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -1
Query: 263 STPGAKNSMIQISSEFVSNLSKLLGVSSITSEDES*RAKDPVAQSKIPIEY 111
S S Q S +S+LSKL G + T+E + +P+ + P +
Sbjct: 844 SVVDVSTSASQRGSPVLSDLSKLTGSARNTAEPVENTSAEPIENTSAPTPF 894
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,269,650
Number of Sequences: 5004
Number of extensions: 46867
Number of successful extensions: 154
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 223909422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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