Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0174
(542 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 84 6e-17
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 8e-13
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 69 2e-12
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 67 8e-12
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 60 2e-09
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 54 1e-07
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 47 1e-05
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 42 3e-04
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 41 8e-04
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 40 0.001
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 36 0.021
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 34 0.065
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_9088| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 32 0.35
SB_48686| Best HMM Match : rve (HMM E-Value=1.2e-19) 32 0.35
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_49759| Best HMM Match : bZIP_1 (HMM E-Value=0.93) 30 1.1
SB_13852| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_56293| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 27 7.5
SB_5372| Best HMM Match : ER_lumen_recept (HMM E-Value=2.5e-19) 27 7.5
SB_46086| Best HMM Match : RVT_1 (HMM E-Value=1.6e-20) 27 9.9
SB_39284| Best HMM Match : WW (HMM E-Value=7.9) 27 9.9
SB_29566| Best HMM Match : HypA (HMM E-Value=0.38) 27 9.9
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 84.2 bits (199), Expect = 6e-17
Identities = 42/83 (50%), Positives = 54/83 (65%), Gaps = 5/83 (6%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKHT-- 425
WCGHC+ L PE+ KAA LKG VKVGALDA H + +Y V G+PTIK+F G K++
Sbjct: 108 WCGHCQRLAPEWAKAATELKGKVKVGALDATVHTVTASRYQVQGYPTIKVFAAGIKNSHS 167
Query: 426 --PYQGQRTAEGFVEAALNAAKE 488
YQG RTA ++ AL+ A +
Sbjct: 168 VEDYQGGRTASDIIQYALDKAAD 190
Score = 63.7 bits (148), Expect = 9e-11
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 5/65 (7%)
Frame = +3
Query: 345 DEHRSVSQKYGVTGFPTIKIFTGSKHTP--YQGQRTAEGFVEAALNAAKEKAYENL---G 509
D H+SV Y + GFPTIKIF +K++P Y GQRTA+G V+AA+ AA+E + + G
Sbjct: 2 DVHQSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIVDAAMRAAQEAVSQRMSGGG 61
Query: 510 KKSSG 524
+ SSG
Sbjct: 62 RSSSG 66
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +1
Query: 163 SSSDVIELTPSNFDKLLTNSDEIWIIEFFAPGVDIVKALFPNIKK 297
+ DV+ELT +NF+K + NS ++W++EFFAP + L P K
Sbjct: 77 NKEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAK 121
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 70.5 bits (165), Expect = 8e-13
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALKGI---VKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHT 425
WCGHCK L PEY+KAA+ L+ + + +DA ++QKY V G+PT+K+F K T
Sbjct: 204 WCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYPTLKVFRKGKAT 263
Query: 426 PYQGQRTAEG 455
Y+GQR G
Sbjct: 264 EYKGQRDQYG 273
Score = 68.9 bits (161), Expect = 2e-12
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALK---GIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHT 425
WCGHCKSL PEY KAA+ +K V +DA ++Q++ V+G+PT+KIF
Sbjct: 89 WCGHCKSLAPEYAKAAKKMKLNDPPVPFAKMDATVASDIAQRFDVSGYPTLKIFRKGTPY 148
Query: 426 PYQGQRTAEGFVE 464
Y+G R G VE
Sbjct: 149 EYEGPREESGIVE 161
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 172 DVIELTPSNFDKLLTNSDEIWIIEFFAPGVDIVKALFPNIKK 297
DV L NFD+++ ++ I ++EF+AP K+L P K
Sbjct: 62 DVSVLNSKNFDRVIEENNII-LVEFYAPWCGHCKSLAPEYAK 102
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 178 IELTPSNFDKLLTNSDEIWIIEFFAPGVDIVKALFPNIKK 297
+ LT NF +++ N + + ++EFFAP K L P +K
Sbjct: 179 LTLTKENFTEVV-NRESLMLVEFFAPWCGHCKQLAPEYEK 217
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALKGI---VKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHT 425
WCGHCK+L PEY KAA LK +K+ +DA + +K+ V G+PTIK F K +
Sbjct: 52 WCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDGKPS 111
Query: 426 PYQGQRTAEGFV 461
Y G RTA V
Sbjct: 112 EYAGGRTAPEIV 123
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 4/98 (4%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKHTPY 431
WCGHCK L P + + K + D + + V FPTIK F + Y
Sbjct: 413 WCGHCKQLAPIWDQLGEKYKDHADIVVAKMDSTANEVEGVKVHSFPTIKYFPKEGEAVDY 472
Query: 432 QGQRTAEGFV---EAALNAAKEKAYENLGKKSSGYSSD 536
G RT + FV E+ A E A E G D
Sbjct: 473 NGGRTLDDFVKFLESGGKAGNEPAAEGEEPPPEGEGDD 510
Score = 34.7 bits (76), Expect = 0.049
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +1
Query: 124 ILLCATGSLALYDS---SSDVIELTPSNFDKLLTNSDEIWIIEFFAPGVDIVKALFPNIK 294
+LL A SLA + DV+ LT NFD+ + + + ++EF+AP KAL P
Sbjct: 6 VLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHV-LVEFYAPWCGHCKALAPEYA 64
Query: 295 K 297
K
Sbjct: 65 K 65
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 166 SSDVIELTPSNFDKLLTNSDEIWIIEFFAPGVDIVKALFPNIKKLPE 306
S V L NFD++ N D+ +EF+AP K L P +L E
Sbjct: 383 SKPVKVLCGKNFDEVARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGE 429
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 67.3 bits (157), Expect = 8e-12
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 10/106 (9%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALK---GIVKVGALDADE-HRSVSQKYGVTGFPTIKIF-TGSK 419
WCGHCK L PEY+ AA ALK V + +D E + KYGV+G+PT+KIF G
Sbjct: 566 WCGHCKRLAPEYETAAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEM 625
Query: 420 HTPYQGQRTAEGFV-----EAALNAAKEKAYENLGKKSSGYSSDKV 542
Y G R + G + +A ++ + K+ ++L KK S+ V
Sbjct: 626 SKDYDGPRDSSGIIRYMKKQAGPSSVEIKSVDHLEKKLDDAESNVV 671
Score = 35.9 bits (79), Expect = 0.021
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALKGI--VKVGALDADEHRSVSQKYGVTGFPTIKI 404
WCGHCKSL P+Y + L+ + + + +DA + + V G I I
Sbjct: 891 WCGHCKSLEPKYNELGEKLQDVKDIVIAKMDATAN-DAPPNFSVQGIIIISI 941
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +1
Query: 166 SSDVIELTPSNFDKLLTNSDEIWIIEFFAPGVDIVKALFPNIKKLPE 306
SSDV++L SNF + D I ++EFFAP K L P + E
Sbjct: 537 SSDVLDLGDSNFKSGVAGKD-IMLVEFFAPWCGHCKRLAPEYETAAE 582
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARAL--KGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHTP 428
WCGHCK L P Y++ A V + +DAD R + ++ V GFPTIK F TP
Sbjct: 50 WCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDADGDRDLGSRFDVKGFPTIKYFPKGSTTP 109
Query: 429 --YQGQRTAEGFVE 464
Y G R F++
Sbjct: 110 EEYNGGRDINDFIK 123
Score = 35.1 bits (77), Expect = 0.037
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +1
Query: 175 VIELTPSNFDKLLTNSDEIWIIEFFAPGVDIVKALFPNIKKLPE 306
VI+LT NFD+++ N ++ ++EF+AP K L P ++L E
Sbjct: 24 VIDLTKDNFDEVV-NGEKFALVEFYAPWCGHCKQLAPTYEQLGE 66
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 53.6 bits (123), Expect = 1e-07
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARAL---KGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGS 416
WCGHC + P Y KAA+ L + A+D +H+ V++K + G+PT+K++ S
Sbjct: 78 WCGHCNEMKPNYYKAAQVLHDEDANCNLAAVDCTKHKDVAKKVALAGYPTVKLYKAS 134
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALKGIVK--VGALDADEHRSVSQKYGVTGFPTIKIFTGSKH-T 425
WCGHCK+ P+Y+KAA K LD + V K V G+PT++ + K
Sbjct: 175 WCGHCKNAKPKYEKAAETFKDQPNRVFAKLDCTKFGDVCDKEEVNGYPTLRYYLYGKFVV 234
Query: 426 PYQGQRTAEGFV 461
Y G R E +
Sbjct: 235 EYDGDRVTEDLI 246
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 52.0 bits (119), Expect = 3e-07
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARAL--KGIVKVGALDADEHRS--VSQKYGVTGFPTIKIFTGSKH 422
WC HC+ L+P+ + AA AL KG+ + +D + RS + + + G+P++K+F K+
Sbjct: 48 WCHHCQELLPQLEGAANALAAKGLFQFAKVDCTDPRSKVLCDNFKIEGYPSVKLFKFGKY 107
Query: 423 T-PYQGQRT---AEGFVEAALNAAKEKA 494
Y GQRT ++E+ + A ++A
Sbjct: 108 AGDYIGQRTDAALVNYMESVTSTASQQA 135
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 50.8 bits (116), Expect = 7e-07
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALKG-IVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHTPY 431
WC C L+PEY+KAAR+ G V G +D H + +Y + +PT ++ S+ +
Sbjct: 313 WCPPCMRLLPEYRKAARSFVGKPVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQPHQF 372
Query: 432 QGQRTAEGFVE 464
G A +E
Sbjct: 373 IGHHNALDIIE 383
Score = 46.8 bits (106), Expect = 1e-05
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGS 416
WCG C P+Y++ A+ LKG V+ ++ ++ + + + +PT++++ GS
Sbjct: 462 WCGPCMRFAPKYEQLAKMLKGKVRAAKVNCEQDYGLCSEANIHSYPTVRLYLGS 515
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 169 SDVIELTPSNFDKLLTNSDEIWIIEFFAPGVDIVKALFPNIKKLPEL 309
S V E+ NF + S++ W+++F+AP P ++L ++
Sbjct: 433 SIVSEVNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKM 479
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALKGIVKVG---ALDADEHRSVSQKYGVTGFPT 395
WCGHCK++ PEY AA+ LK G A+DA + ++ +++ V G+PT
Sbjct: 110 WCGHCKAMKPEYVDAAQTLKEQEIPGVLAAVDATKEAALGKRFKVEGYPT 159
Score = 30.3 bits (65), Expect = 1.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAAR 305
WCGHCK PE AA+
Sbjct: 223 WCGHCKKAKPELMSAAK 239
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +3
Query: 252 TWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 407
+WCG CKS+ P Y + K V + +D D + ++ K GVT PT + F
Sbjct: 37 SWCGPCKSIAPVYSGLSEKYKQAVFL-KIDVDVCQELAAKQGVTAMPTFQFF 87
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 40.7 bits (91), Expect = 8e-04
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALK 314
WCGHCK L PEY+ AA ALK
Sbjct: 41 WCGHCKRLAPEYETAAEALK 60
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +1
Query: 166 SSDVIELTPSNFDKLLTNSDEIWIIEFFAPGVDIVKALFPNIKKLPE 306
SSDV++L SNF + D I ++EFFAP K L P + E
Sbjct: 12 SSDVLDLGDSNFKSGVAGKD-IMLVEFFAPWCGHCKRLAPEYETAAE 57
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARAL----KGIVKVGALDADEH----RSVSQKYGVTGFPTIKIFT 410
WC HCK + P+YK A+ L V++ +D + + +KY V PTI +F
Sbjct: 162 WCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSANNMATKKTCKKYNVKFLPTIYLFH 221
Query: 411 GSKHT-PYQG----QRTAEGFV-EAALNAAKEKAYENLGKK 515
K ++G +++ +GFV +A A + ++ KK
Sbjct: 222 DGKFVEEFEGNNRNKKSIKGFVMDAVKEADPSMKFSDVPKK 262
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 35.9 bits (79), Expect = 0.021
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +3
Query: 252 TWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 407
TWCG CKS+ P + + +V + +D D+ + ++ G+ PT +
Sbjct: 38 TWCGPCKSIAPVFTNLSMKFMDVVFL-KVDVDQCQLTAESCGIRAMPTFHFY 88
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 34.3 bits (75), Expect = 0.065
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 252 TWCGHCKSLVPEYKKAARALKGIVKVGALDAD 347
TWCG C+ + P++++ A+ KG VK +D D
Sbjct: 21 TWCGPCRMIGPKFEEMAKEFKG-VKCAKVDVD 51
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 419
WC CK L P G V + +D D ++ +GV PT+ G K
Sbjct: 2 WCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 56
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 419
WC CK L P G V + +D D ++ +GV PT+ G K
Sbjct: 48 WCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 102
>SB_9088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 31.9 bits (69), Expect = 0.35
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = +3
Query: 264 HCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQR 443
H + + EY KA + K + G + +DE+ + G GFP + + T +
Sbjct: 76 HSEERMKEYMKALKT-KILEIRGCMMSDEYFESLLEGGAAGFPAVGLSERQPRTATEQTE 134
Query: 444 TAEGFVEAALNAAKEKAYENLGK 512
AE + A+ A K+ E +GK
Sbjct: 135 IAEAREKLAILVASGKSREMVGK 157
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 31.9 bits (69), Expect = 0.35
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALKGI--VKVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKHT 425
WCG C + P AR + I V V +DAD++ + V+ +P+I +F G K +
Sbjct: 546 WCGMCINFAPVLLAVARFFQDISQVSVTRIDADQN-DLPWNLTVSSYPSIILFPAGRKDS 604
Query: 426 ----PYQGQRTAEGFVEAALNAAKEKAYENLGKKSSGYS 530
P RTA +E E L ++ G++
Sbjct: 605 SIAFPSNTPRTATRLIEFIEEHGSEALRVALYGRTDGFN 643
>SB_48686| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 722
Score = 31.9 bits (69), Expect = 0.35
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = +3
Query: 264 HCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQR 443
H + + EY KA + K + G + +DE+ + G GFP + + T +
Sbjct: 76 HSEERMKEYMKALKT-KILEIRGCMMSDEYFESLLEGGAAGFPAVGLSERQPRTATEQTE 134
Query: 444 TAEGFVEAALNAAKEKAYENLGK 512
AE + A+ A K+ E +GK
Sbjct: 135 IAEAREKLAILVASGKSREMVGK 157
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 31.1 bits (67), Expect = 0.61
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARAL----KGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKH 422
WC C +L P+Y+KAAR L K ++ ++ + ++ GV + T+ +T H
Sbjct: 50 WCSDCDNLRPKYEKAARDLAKEHKFVMAKALMNTNSTQTTCLPMGVHYWRTLLAYTIGVH 109
>SB_49759| Best HMM Match : bZIP_1 (HMM E-Value=0.93)
Length = 316
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 414 SKHTPYQGQRTAEGFVEAALNAAKEKAYENLGKKSSGYSSDK 539
S+ TP GQR G EAALNA + + + +G +S K
Sbjct: 185 SESTPTAGQRLVSGAAEAALNALRTGRVTSQAEWETGENSKK 226
>SB_13852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 846
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 414 SKHTPYQGQRTAEGFVEAALNAAKEKAYENLGKKSSGYSSDK 539
S+ TP GQR G EAALNA + + + +G +S K
Sbjct: 715 SESTPSAGQRLVSGAAEAALNALRTGRVTSQAEWETGENSKK 756
>SB_56293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 324 KVGALDAD---EHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTAEGFVEAALNAAKEKA 494
++ A+D D HRS+S ++G + T + +G + PY ++ ++ + L A ++
Sbjct: 169 EMSAVDWDASYSHRSISGEHGTSRLATARACSGELYNPYTDVHSSTSYLSSQLTAPSARS 228
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 255 WCGHCKSLVPEYKKAARALKGIVKVGALDADE 350
WCG C+ + P++KK A V +D DE
Sbjct: 41 WCGPCRQIKPKFKKMALEEFKDVFFAKIDVDE 72
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 188 HRVISTNYLQIPTKFGSLSSLHLVWTL*KPC 280
H++IS N+ ++P + + VW++ KPC
Sbjct: 2555 HKIISRNFSELPNENVISKANQTVWSVVKPC 2585
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 27.5 bits (58), Expect = 7.5
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +3
Query: 270 KSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTA 449
++L +Y K R L I KV D ++ K + +PT+K++ Y G+R A
Sbjct: 6 EALGEQYSKEKRDLT-IAKV---DCTSDVNLCVKQNIRAYPTMKLYYDGDIKRYTGRRNA 61
Query: 450 EG---FVEAALNAAKEKAYENLGKKSS 521
E FV+ + + K+ ++ G +S
Sbjct: 62 EDMKVFVDKIVLKPEGKSKDSEGLSTS 88
>SB_5372| Best HMM Match : ER_lumen_recept (HMM E-Value=2.5e-19)
Length = 229
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 321 VKVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKHTPYQGQRTAEGFVEAAL 473
V++ ++ + V Q +T +PTIK+F G+ Y G A+ V+A +
Sbjct: 10 VRLARVNCFDWTDVCQDNNITVYPTIKLFRKGADELIYGGPLDADHLVKAVI 61
>SB_46086| Best HMM Match : RVT_1 (HMM E-Value=1.6e-20)
Length = 723
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 252 TWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSV 362
TW HC ++ + K AL+ + K G LDA E +V
Sbjct: 682 TWVAHCDFIIQKANKRLYALRVLKKCG-LDAIEQITV 717
>SB_39284| Best HMM Match : WW (HMM E-Value=7.9)
Length = 251
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 225 RNLDH*VLC--TWCGHCKSLVPEYKKAARALKGIVKVGALDADE 350
R LD + C TW HC ++ + K AL+ + K G LDA E
Sbjct: 83 RLLDVLISCDLTWVAHCDFIIKKANKRLYALRVLKKCG-LDAIE 125
>SB_29566| Best HMM Match : HypA (HMM E-Value=0.38)
Length = 701
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +3
Query: 318 IVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKH---TPYQGQRT--AEGFVEAALNAA 482
+V+ G + +DE+ + G G P ++ F S H T G++T A+ + A+ A
Sbjct: 478 LVERGCMMSDEYFKSLLEGGAAGLPAVESFDCSTHPAETATGGEQTEVADAREKLAILVA 537
Query: 483 KEKAYENLGK 512
K+ E +GK
Sbjct: 538 SGKSREMVGK 547
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,838,999
Number of Sequences: 59808
Number of extensions: 342979
Number of successful extensions: 867
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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